Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01632 ATGCAGTTCTCACAACTATTTTTGTTCATTTTCATGGTTTTAGTAATTACTTGCAATGTCTGTGAGTCCCAAAATTGTGCTAATCCACCCAAGACCATTATTGTTAGTAAGTCAAGCAAAGCAAATTTTGAAACAATTCAAAGTGCCATCGACTCTGTTCCTGAACAAAACTCTCAATGGATTCACATCCAAATTTCTTCTGGCGTTTACAAAGAACAGGTCCAAGTTCCGATGAACAAACCATGCATTTATCTAGAAGGAGCTGGTAGCAAATCCACAAGTATCGAATGGGGTGACCATCTTAATGCCACTTTCTTTTCTAAAGCAAATTATACTATTGCAAATGGCATTACTTTCACGAATTCACTCAACACACCGGATCAAATTGCAATCACACAAGCTGTGGCAGCTCGAATTCATGCAGATAAATGTGCTTTCTTTAACTGTGCTTTCTTAGGGGTGCAAGACACCTTATATGATGACTTTGGTCGTCATTACTACCATAATTGCTATATTCAAGGTGGGGTTGATTTCATATTTGGAAATGGTCAATCAATCTTTGAGGCAAGCCAATTATATTTTTCAATGGGAAAAGATGGTCCCAAAAGGAATGGGTGTTTTACAGCACAAGAAAGGGAGTCACCAAATGACACAAGTGGATTTGTTTTTAAAAATTGTTCCTTGAACGGGACAGGAGGACATGCTATACTAGGGAGATCTTTAAAGGCTTATGCAAGAGTCATCATAGCAAATTCATTCCTATCAGATGTGGTATCACCTGAGGGTTGGAATGCTCGTACCTTTGTTGGCCAGGAAAAAACAATTACATTTGTGGAGGAGGGAAATTATGGACCGGGAGCAAATAAATCCAAACGTGTGAATTGGGTGAAGCACTTAAGTGGACATGAACTTGATCAATTCCTCGATATCTCATTTATTGATAAAGAAGGGTGGTTTGCAAGATTGCCAGCCAAGATCTTCATTTAA 987 0.385 MQFSQLFLFIFMVLVITCNVCESQNCANPPKTIIVSKSSKANFETIQSAIDSVPEQNSQWIHIQISSGVYKEQVQVPMNKPCIYLEGAGSKSTSIEWGDHLNATFFSKANYTIANGITFTNSLNTPDQIAITQAVAARIHADKCAFFNCAFLGVQDTLYDDFGRHYYHNCYIQGGVDFIFGNGQSIFEASQLYFSMGKDGPKRNGCFTAQERESPNDTSGFVFKNCSLNGTGGHAILGRSLKAYARVIIANSFLSDVVSPEGWNARTFVGQEKTITFVEEGNYGPGANKSKRVNWVKHLSGHELDQFLDISFIDKEGWFARLPAKIFI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01632 328 Gene3D - 27 325 IPR012334 -
Cca10g01632 328 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 325 - -
Cca10g01632 328 Pfam Pectinesterase 33 313 IPR000070 GO:0030599|GO:0042545
Cca10g01632 328 PANTHER PECTINESTERASE 3 325 - -
Cca10g01632 328 SUPERFAMILY Pectin lyase-like 29 320 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01632 Cca-Chr10 28316976 28319460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01632 31 272 Carbohydrate Esterase AT2G19150 48.790 6.94e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01632 - - aprc:113866591 485.337