Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01615 ATGCTTCTCATAGTCTTCTCCATCTTGTTCCTATTACTTCTCCAGACCCTATGGCACTTAACTTCCACAAAAGGCAAAAACTCACCCCCTTCCCCTCCAAAGTTTCCCATAATAGGAAACCTCCACCAACTGGGCTCCCATCCCCACCGCACCCTCCGATCTCTGGCCCAAAAGCACGGCCCATTAATGCTTCTCCACCTCGGGAGGGTCCCACTTGTGGTCATCTCATCAGCCGACGCCGCACGTGCGGTCATGAAAACCCACGACCGCCTCTTCTCGGACAGACCGCACAGTAAAATGTTCGACATCCTCTTGTACGGCTCAAACGACGTCGCTTCGGCGCCGTACGGAGAGTACTGGAGGCAAATGAGGAGCATCTCCGTGTTGCACCTTCTCAGCGCCAAAAGGGTTCGATCCTTTCGCGCGGTGAGAGAAGAGGAAGTGGAAGCCACCATGGACAACATTCGACACTCTTGTTCCTCCGGTTCGACGTTGCTGAACTTGAGCGAAACGTTGTCTAGGGTTACCAACAACGTAGTTTGTCGCGTTGCTTTGGGGAGAACGTACGGTGGAGAACGTGGGAGGGGGTTTAAGAGGTTGTTGGAGGAGTTTACGGAGTTGCTTGGGAGCTTTGTTGTTGGGGACTACGTGCCTTGGCTTGAGTTCTTAGATAGGGTTTCTGGGTTGCATGGTACAGCAAAAAGAGTGGCTCAAGAGTTTGATGAGTTTTTGCATGAGGTTATTGAAGAGCATGTGAGTGGTCTTGGAGGAACCGACATGGAACATGGCAATTTTGTGGAGGTTTTGCTTCGGATCCAAAGGACAAATGATGTTGGCTTTCCTATAGACAGGACTGTCATCAAGGCTATTATATTGGATATGTTTGCAGCAGGCACAGACACTACATCAACCCTCTTAGAGTGGACAATGACAGAACTCTTAAGACATCCAATTGTAATGAAGAAATTGCAAGACGAAGGTAAGAGTGTGGCTGGTGACAAAAAGCACATAACTGAAGAGGACTTAGGTCACATGCAATACTTAAAGGCAGTGGTTAAAGAAACTCTAAGATTACACCCTCCAGTCCCATTACTACTCCCACGACAAAGCATGGAAGACATCAAATTGAATGATTACCACATTGAAGCTGGCACACGAGTAATTGTAAATGCTTGGGCAATTGCAAGAGATCCTATGTATTGGGATCAACCTGAAGAATTCAAACCTGAGAGATTCTTAAATAGTTCAATAGATGTAAAAGGAAATGACTTCCAATTGATCCCATTTGGAGCAGGGAGAAGGGGGTGCCCAGGAACAATGTTTGCTATGATGGTGAATGAACTTGTGCTAGCCAACCTTGTCCATCAATTTGATTGGGCATTACCAAGTGGGGATAACACATTGGACATGTCTGAAACAATTGGTTTGACTATGCAAAGAAAAATTCCCCTCATGGCGGTTGCAGTCCCAAATTAA 1476 0.4695 MLLIVFSILFLLLLQTLWHLTSTKGKNSPPSPPKFPIIGNLHQLGSHPHRTLRSLAQKHGPLMLLHLGRVPLVVISSADAARAVMKTHDRLFSDRPHSKMFDILLYGSNDVASAPYGEYWRQMRSISVLHLLSAKRVRSFRAVREEEVEATMDNIRHSCSSGSTLLNLSETLSRVTNNVVCRVALGRTYGGERGRGFKRLLEEFTELLGSFVVGDYVPWLEFLDRVSGLHGTAKRVAQEFDEFLHEVIEEHVSGLGGTDMEHGNFVEVLLRIQRTNDVGFPIDRTVIKAIILDMFAAGTDTTSTLLEWTMTELLRHPIVMKKLQDEGKSVAGDKKHITEEDLGHMQYLKAVVKETLRLHPPVPLLLPRQSMEDIKLNDYHIEAGTRVIVNAWAIARDPMYWDQPEEFKPERFLNSSIDVKGNDFQLIPFGAGRRGCPGTMFAMMVNELVLANLVHQFDWALPSGDNTLDMSETIGLTMQRKIPLMAVAVPN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01615 491 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 Gene3D Cytochrome P450 16 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 SUPERFAMILY Cytochrome P450 29 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 Pfam Cytochrome P450 29 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Cca10g01615 491 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01615 491 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 489 - -
Cca10g01615 491 PANTHER CYTOCHROME P450 71B11-RELATED 5 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01615 Cca-Chr10 27781575 27790787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01615 24 488 Cytochrome P450 AT3G48270 54.701 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01615 - - gmx:100810137 611.298