Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01612 ATGGCCGGAAATGAAGCATTAGGATGTAGGGCAAGATGTGGATGCATCCTGATTCATATTGGCCATGATGGGTTTGTAAACCAACAAAGCTCTGGTTTTGGAGGCAACAGTGGCTTTAATCCATTTGAGCAGATATTTCGTGACCATGATTCTCTTGGAGGAAACAGCAAAACTGTTATGATAGCATGTGTCAGTCCAGCTGACACCAATGCTGAAGAGACATTGAACACTCTGAAGTATGCTAACCGTGCTCGCAATATTCAGAACAAGGCAGTTATCAATCGTGACCCAGTGGGAGCTCAGATGCAAAGAATGCGAAGTCAGATTGAGCAATTGCAGTCTGAGCTTCTATTTTACAGAGGTGATGCTGGTGGGGCATTCGAGGAACTTCAGATTCTTAAACACAAAATATCCTTACTAGAAGCAAGCAATGCAGAGCTACAGCGGGAGCTTAAAGAACGTCGAGTAACTTGTGAGAGTTTATCACAACGTGCTTGTGATGCTCAGGTTGAAAAGGACCAACTGATCTTGAAAATCGAATCAATTCGTAATGGTAAATCTTGGGATGAAATTGAATCAAATTCAAATCAGGTTTGA 597 0.4221 MAGNEALGCRARCGCILIHIGHDGFVNQQSSGFGGNSGFNPFEQIFRDHDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQNKAVINRDPVGAQMQRMRSQIEQLQSELLFYRGDAGGAFEELQILKHKISLLEASNAELQRELKERRVTCESLSQRACDAQVEKDQLILKIESIRNGKSWDEIESNSNQV 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01612 198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 120 IPR027417 -
Cca10g01612 198 Coils Coil 130 164 - -
Cca10g01612 198 Pfam Kinesin motor domain 50 87 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca10g01612 198 Coils Coil 102 122 - -
Cca10g01612 198 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 49 197 - -
Cca10g01612 198 ProSiteProfiles Kinesin motor domain profile. 1 87 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca10g01612 198 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 49 197 - -
Cca10g01612 198 Gene3D Kinesin motor domain 46 120 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01612 Cca-Chr10 27717252 27721545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01612 46 89 Calmodulin-binding Proteins AT5G65930 50.980 1.78e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01612 - - gmx:100817984 280.411