Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01610 ATGGATTACATGATATTTATCCCACTAATTTTAGCCATAGTATGCATCCACATCCTAGTCTTTAGCCATAGTAGCAAAACCTCAAAATCTCCCAAGCTCCCACCTGGTCCTCCTAGTTTTCCCATAATTGGAAACATATTACAACTTAGCCCAACCAAACTACACCAAGCACTTGCTAAACTCTCCAAAACATATGGACCTATTATAACGGTTAAAATAGGCACTATTACCACTGTGGTTATTTCCTCTCCAACCTTAGCCAAAGAAGCCCTTCATAAAAAAGACCAAGCCTTAGCTAGTAGATTTGTACCCGACTCAATTAAAGCACTTTCACATGATCAATCTTCCATAGTGTTTTTGCCTGTATCCACAAAGTGGAAAGCCTTTAGAAAACTATGTGCCACCAAAATATTCTCTGCTCAAAAACTTGACTCTACCCAAGCCCTACGCCAAAAGAAGCTGAAAGACCTACTTGATCACTTGCATGAAAATTGCGAAAAGGGTAGGGTTGTTGATATTGGAAATGTTATCTCGTGTGTGCTCGTGGAAGCTTCAAAGGCTAATGTTGCAGACTATTATCCTATTTTACGTGGACTTGATCCACAGGGGGCACGAAGAAGGATGAAAAATTATTACCAGATGTTACTTGATGTTTTTGATTGTATCATTGAAGAAAGAATTCAAAGGGGAGATTCCCTCGAAGGAAGTGATGTCTTAGACTCATTTCTTGATATCATCCGAAGCGAAAATTCAGAATTATCACGCCATGACGTGTTACATCTATTTCTGGACTTATTTGTAGCTGGGTTGGATACAACAACAGCCACAATAGAATGGGTTATGGCAGAGTTACTATGCAATCCGGAAAAACTGACAAAAATCAAAAGAGAACTTCAACAAGTCCTTAGCAAAGAAAGAGAACTTAAAGATTCAGATATCTCTAAGCTTAATTACCTACATGCTGTTGTAAAAGAGACCCTTAGATTGCACCCAACAGCCCCAATACTAATTCACAAATCAGTGGCAGAAGTGGACATAGGTGGCTTTAGAGTACCCAAAGATGCACAAGTTCTAGTTAATGTTTGGAGCATGGGAAGGGACTCAACCATTTGGACTGAACCAAATTTGTTTCTACCAGAAAGATTTTTGGAGAATGAAAGGGATTTTAGAGGAGATGATTTAGGGTTTATTCCTTTTGGGTCTGGAAGAAGAATGTGTCCTGGCATTCCACTAGCTAACAGGGTTGTGCATACCATACTAGCCTCACTTCTATTCCATTTTGATTGGAAGCTAGCAGATGGGTGCAAAGCAAAAGACATGGACATGACCGAAAATTTTGGAATTACTTTACACAAAGTCAAGCCTCTCATGGCAATTCCCATCAAAGAATAG 1392 0.3937 MDYMIFIPLILAIVCIHILVFSHSSKTSKSPKLPPGPPSFPIIGNILQLSPTKLHQALAKLSKTYGPIITVKIGTITTVVISSPTLAKEALHKKDQALASRFVPDSIKALSHDQSSIVFLPVSTKWKAFRKLCATKIFSAQKLDSTQALRQKKLKDLLDHLHENCEKGRVVDIGNVISCVLVEASKANVADYYPILRGLDPQGARRRMKNYYQMLLDVFDCIIEERIQRGDSLEGSDVLDSFLDIIRSENSELSRHDVLHLFLDLFVAGLDTTTATIEWVMAELLCNPEKLTKIKRELQQVLSKERELKDSDISKLNYLHAVVKETLRLHPTAPILIHKSVAEVDIGGFRVPKDAQVLVNVWSMGRDSTIWTEPNLFLPERFLENERDFRGDDLGFIPFGSGRRMCPGIPLANRVVHTILASLLFHFDWKLADGCKAKDMDMTENFGITLHKVKPLMAIPIKE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01610 463 PRINTS E-class P450 group I signature 320 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 PRINTS E-class P450 group I signature 277 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 PRINTS E-class P450 group I signature 396 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 PRINTS E-class P450 group I signature 257 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 PRINTS E-class P450 group I signature 406 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 PRINTS E-class P450 group I signature 360 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 PRINTS P450 superfamily signature 397 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 PRINTS P450 superfamily signature 268 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 PRINTS P450 superfamily signature 321 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 177 - -
Cca10g01610 463 Coils Coil 291 311 - -
Cca10g01610 463 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 177 - -
Cca10g01610 463 Gene3D Cytochrome P450 19 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 Pfam Cytochrome P450 185 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 Pfam Cytochrome P450 34 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 SUPERFAMILY Cytochrome P450 34 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01610 463 PANTHER CYTOCHROME P450 FAMILY PROTEIN 175 461 - -
Cca10g01610 463 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 399 408 IPR017972 GO:0005506|GO:0016705
Cca10g01610 463 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 175 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01610 Cca-Chr10 27662057 27666120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01610 5 463 Cytochrome P450 AT2G45550 41.000 9.37e-136 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01610 - - pvu:PHAVU_010G012700g 666.766