Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01537 ATGGAAAAAACCGTGATTTACGGTCTCACCGCAATTGCGGTCCGATGCCGTTGCGGACAAGGCCGCAACCGCAATATTGCGGCCGCAATGCGGGATGCGGTCCGCAATTTAAAACCCTGGCCCCAGCTAACCCCACTCCTCGGAAAGACCCTGTTGAAGTCATTAGACAAGCACTCGCTAAAGCACTTGTGTTTTACTATCCATTGGCGGGAAGGCTTAATTAGGGAGGGTCCTGATGGCAAACTAATGGTGGATTGCACTGGGGAAGGTGTCTTGTTCATTGAGGCTGATGCAGATGTGACACTTGACCAATTTGGTGATGATTTGAAGCCCCCATTCCCTTGCTTCGATGAGCTCCTTTACAATATTCCTGGTTCAGATGGAATCATTGACTGTCCACTCATGCTCTTACAGGTTATCTTATAG 426 0.4906 MEKTVIYGLTAIAVRCRCGQGRNRNIAAAMRDAVRNLKPWPQLTPLLGKTLLKSLDKHSLKHLCFTIHWREGLIREGPDGKLMVDCTGEGVLFIEADADVTLDQFGDDLKPPFPCFDELLYNIPGSDGIIDCPLMLLQVIL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01537 141 Pfam Transferase family 72 139 - -
Cca10g01537 141 Gene3D - 29 141 IPR023213 -
Cca10g01537 141 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 71 139 - -
Cca10g01537 141 PANTHER ALCOHOL ACYLTRANSFERASE 71 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01537 Cca-Chr10 25189190 25189711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01537 57 141 Monolignol Biosynthesis Gene Families AT5G48930 32.941 9.24e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01537 K19861 - gmx:100795237 122.864