Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01492 ATGGTGTGCATAAGGAAGGCGACGGTGAAGGACCTTCTGGCGATGCAGGCTTGCAACCTGTTCTGCCTGCCAGAGAACTACCAGATGAAGTACTACCTCTACCACATCCTCTCCTGGCCCCAACTCCTCTACGTCGCCGAAGACTACAACAACCGCATCGTCGGCTACGTCCTCGCCAAGATGGAGGAGGAGACCTCCGACTGCCACGGCCACATCACCTCCCTCGCCGTCCTCCGCACCCACCGCAAGCTCGGCCTCGCCACCAAGCTCATGACCGCCGCCCAGAACGCCATGGAGCAGGTCTTTGGCGCCGAATACGTCTCCCTCCACGTCCGCAAGAGCAACCGCGCCGCCTTCAACCTCTACACCGAAACCCTCGGCTACAAGATTCACGACGTCGAGGCTAAGTACTACGCCGACGGGGAGGATGCTTACGACATGAGGAAGCAGCTCAAGGGGAAGcagcaccaccagcatcaccataaccatcaccatcaccaccaccaccaccaccatcatcaccaccacgaccacGGCGGCGGCTGTTGCTCCGGGGAGGCCAAGGGGAATGCCAAGTCCGCCTGA 585 0.5368 MVCIRKATVKDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNNRIVGYVLAKMEEETSDCHGHITSLAVLRTHRKLGLATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQHHQHHHNHHHHHHHHHHHHHHDHGGGCCSGEAKGNAKSA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01492 194 CDD NAT_SF 43 110 - -
Cca10g01492 194 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016407
Cca10g01492 194 Gene3D - 2 187 - -
Cca10g01492 194 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016407
Cca10g01492 194 PANTHER ACYL-COA N-ACYLTRANSFERASE-RELATED 1 171 - -
Cca10g01492 194 MobiDBLite consensus disorder prediction 152 178 - -
Cca10g01492 194 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 171 IPR045047 GO:0004596|GO:0006474|GO:0031415
Cca10g01492 194 MobiDBLite consensus disorder prediction 151 194 - -
Cca10g01492 194 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01492 Cca-Chr10 23794507 23795156 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca10g01492 Acetyltransf_1 1e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01492 K20791 - gmx:100810038 337.035