Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01473 ATGGAGAGACATGCAAATGCATTAAGGTTTCTTCAGGAGCTCTTCGATTATGATGCTCATGGAAGACCTACTCGACAAACTTTTCAACAAGATACTAGTGGTGAAGTATGTGCTAATAAAGGGACTTTTGACCTCGACAATATGACTTTAGAGGATCGGGAGTACTATGATAGTTTGTTCGAGGAGGGATTTAAGCGTTTAGGAACATGTTTCTTGACTTCGTGGTTCAAACCTAAGTTGTTGGAAGAAAAGGAATTTGTCGCTAGTGGTGTTGGGTCTGGAGATTGTATAGGGTTTAGGTCTTTAGGAACAAGTTTCTTAATTTCATGGTGGAAATCAAAGGAATTTGTCCTTGATGGTGTTGGTTCTGGAGATTGTGTAGGGTTTGGGTTTGTAGGAACAAACCTCTTGATTTCATTGTGGAAGCCAAAGTTGTTGGAAAAAAAAAAGGAATTTGTCATTGATGGTGTCAGGTCAAAAGATTATCTTGTgatggaagagcatgggctaaagGAAAAGTCTCTTGATTTCATGGTGGAAATCTATTTTTTGGAAAAAGAAAAGGACTTTGTTTTTGGTGGTGTTGGGTTTGGAGATTGTGTAGGATTTAAGCGTTTAGGAACATGTTTCTTGACTTCGTGGTTCAAACCTAAGTTGTTGGAAGAAAAGGAATTTGTCGCTAGTGGTGTTGGGTCTGGAGATTGTATAGGGTTTAGGTCTTTAGGAACAAGTTTCTTAATTTCATGGTGGAAATCAAAGGAATTTGTCCTTGATGGTGTTGGTTCTGGAGATTGTGTAGGGTTTGGGTTTGTAGGAACAAACCTCTTGATTTCATTGTGGAAGCCAAAGTTGTTGGAAAAAAAAAAGGAATTTGTCATTGATGGTGTCAGAAGCAAAAGCTTGAATTGCAGAGAAGTTCAGATTGCGAAGTTATTATTAGATGGGGCAGTGACTACATGTTGTTTAGCAAGGCATGCTCTAAACTTGCTTCGTGAAAGGAAAGATGGATATGATATAGTGATCAGCGATGTAAACATGCCTGACATGGATGGTTTTAAACTTCTTGAGCTTGTTGGGCTTGAGATGGATCTTCCTTTCATTAGTGATTGGGCTGGCTTTGGTCGTGTCGGAACTAGTCTCTTAATTTCATGGTGGAAACCTAAGTTGTTGGAACCAAAAGAATTTTTCATTGGTGGGGTCGTTTTAGGTGATTGGGATGGATTTTGGGCTGTAGGAATAGGGGATTGGGTAGGATTTGGGCCAATAGGAACAAGTCTCTTGATTTCATGGTGGAAACCTAAGTTGTTGGAAAAAAAGGAACTTGTCGCTGATGGTGTTGGGTCTGGAGATTGTGTAGGGTTTGGGCCCGTAGGAACAAGTCTCTTAATTTCATGGTGGAAATCAAAGGAATTTTCCCTTGATGGTGTCGGGTTTGGAGATTGTGCAGGGTTTGGGTCTGTAGGAACAAGCCTTTTGATTTCATGGTTGAAGACTAAGTTGTTGGAATAA 1509 0.393 MERHANALRFLQELFDYDAHGRPTRQTFQQDTSGEVCANKGTFDLDNMTLEDREYYDSLFEEGFKRLGTCFLTSWFKPKLLEEKEFVASGVGSGDCIGFRSLGTSFLISWWKSKEFVLDGVGSGDCVGFGFVGTNLLISLWKPKLLEKKKEFVIDGVRSKDYLVMEEHGLKEKSLDFMVEIYFLEKEKDFVFGGVGFGDCVGFKRLGTCFLTSWFKPKLLEEKEFVASGVGSGDCIGFRSLGTSFLISWWKSKEFVLDGVGSGDCVGFGFVGTNLLISLWKPKLLEKKKEFVIDGVRSKSLNCREVQIAKLLLDGAVTTCCLARHALNLLRERKDGYDIVISDVNMPDMDGFKLLELVGLEMDLPFISDWAGFGRVGTSLLISWWKPKLLEPKEFFIGGVVLGDWDGFWAVGIGDWVGFGPIGTSLLISWWKPKLLEKKELVADGVGSGDCVGFGPVGTSLLISWWKSKEFSLDGVGFGDCAGFGSVGTSLLISWLKTKLLE 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01473 502 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR11 317 367 - -
Cca10g01473 502 PANTHER TWO-COMPONENT RESPONSE REGULATOR 317 367 IPR045279 GO:0009736
Cca10g01473 502 SUPERFAMILY CheY-like 317 367 IPR011006 -
Cca10g01473 502 Gene3D - 301 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01473 Cca-Chr10 22908813 22927405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01473 317 367 Response Regulator Gene Family AT2G25180 74.510 2.65e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Cca10g01473 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01473 - K14491 ccaj:109803943 107.071