Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01456 ATGCTCACCAGAGAACTCTCCACGCTCCAGCTCGATGTTTTCCCTCTCCAAGAACTCCACCTAAATGACCAGATCAAGCACGAGATTGTTCCCAATCAAGCACATCTCTCTTTGATTTTTGACAAACTAGAGATTCGCAATGCGTCCAGCTGTGGAACGGAGATTGAGAGCCTCGAGGAAGAGATTATCAATCAGAGCGAGGAACAATCCAAAATGGACCTCATCAGGTTGATCGGCCTCGTTCGTTTTGCCAAGTGCATTCTCTTCGACGCATCAACGCCGTCGCCGAGAGCCGCCATTCTGCGGCGGAACCAATCGTCGGAATTAGCAATTCTGGCATATTATTGGAAGGCGACGACGCTATTGAGGATTTCGCGGCGGGGCTAG 387 0.5039 MLTRELSTLQLDVFPLQELHLNDQIKHEIVPNQAHLSLIFDKLEIRNASSCGTEIESLEEEIINQSEEQSKMDLIRLIGLVRFAKCILFDASTPSPRAAILRRNQSSELAILAYYWKATTLLRISRRG 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01456 128 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 19 111 - -
Cca10g01456 128 PANTHER U BOX DOMAIN-CONTAINING 19 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01456 Cca-Chr10 22298646 22299032 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01456 25 106 U-box Gene Family AT5G01830 43.902 4.65e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01456 - - ccaj:109795803 195.282