Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01449 ATGGACAACTTCGATGATTTGTCAGCAGTTAATTTAAGTGATGATGGAGATGTTAAGCATTCTGTTTCTTCTAAAGAATCTGATGAAAGTGATAacttgacgactgatgacatatatgggctagagtttggaagtgaagaggaagcatatgacttttatgagaaatatgcaaaatgtcgtggttttgtgGTTGAGGATGTTGTTGTGCTTGCATTAGCCCGACATAGAAGACCAAATTCTGTTCAGCAGTCCGTTTTAGATTCCAAATCACATGATGATGTCAAATATTCGGAATCATTTGGCTGCAACGATGTTGATCATTGTCATAGAAAGGGTGTGTACCATAGAGACTTGAAGCCTGAAAACCTTCTTCTTGATGCTTATGGAAATTTGAAGGTTTCTGACTTTGGTTTGAGTGCATTGACTAAACAGGGTGTTGGCCTTCTTCACACCACATGTGGGACCCCAAATTATGTTGCCCCTGAGGTGCTCAGCAATCGAGGATATGATGGTGTGGCAGCTGATGTTTGGTCATGTGGAGTCATCCTATATGTTCTAATGGCTGGATATCTTCCTTTTGAGGAGGCAGACCTTCCAACACTATACAGAAGGATCAATGCTGCAGAATTTGTTTGTCCATTCTGGTTTTCTGCTCACACAAAGTCATTCATACATAAAATTCTGGATCCTAATCCTAAAACAGGAGTACAATTTTTCATTTGTTTCATTCTTAATTTATTTTAG 744 0.3414 MDNFDDLSAVNLSDDGDVKHSVSSKESDESDNLTTDDIYGLEFGSEEEAYDFYEKYAKCRGFVVEDVVVLALARHRRPNSVQQSVLDSKSHDDVKYSESFGCNDVDHCHRKGVYHRDLKPENLLLDAYGNLKVSDFGLSALTKQGVGLLHTTCGTPNYVAPEVLSNRGYDGVAADVWSCGVILYVLMAGYLPFEEADLPTLYRRINAAEFVCPFWFSAHTKSFIHKILDPNPKTGVQFFICFILNLF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01449 247 ProSitePatterns Serine/Threonine protein kinases active-site signature. 113 125 IPR008271 GO:0004672|GO:0006468
Cca10g01449 247 ProSiteProfiles Protein kinase domain profile. 1 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g01449 247 Pfam Protein kinase domain 105 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g01449 247 PANTHER SERINE/THREONINE KINASE 103 237 - -
Cca10g01449 247 SMART serkin_6 4 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g01449 247 SUPERFAMILY Protein kinase-like (PK-like) 105 233 IPR011009 -
Cca10g01449 247 MobiDBLite consensus disorder prediction 1 33 - -
Cca10g01449 247 Gene3D Transferase(Phosphotransferase) domain 1 101 238 - -
Cca10g01449 247 MobiDBLite consensus disorder prediction 18 32 - -
Cca10g01449 247 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 8 103 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01449 Cca-Chr10 22145162 22151950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01449 105 238 CBL-interacting serine-threonine protein kinases AT5G35410 77.612 8.61e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Cca10g01449 Pkinase 7.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01449 - - gmx:100784786 268.085