Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01448 ATGAACTTTCTAGCTAGTAATTCAACAACCACCATGTCAAAGTTGTTCTATATTTGTTGTTGTGTCCTTATTATTTTACCAACCATGGTCTTAGGATATTCTTGTTCATGTGACACTGAAGAGGGTAACAAGAGTGATCCAAGTGAAGTCCTCCACTACAAACTTGGCTCAATTGCTTCTGTACTTTTTGCTGGTGCTCTTGGTGTGAGCCTTCCATTGTTGAGCAAGAAAATCCCAGCACTTAACCCCAAGAATGACATATTCTTCATGGTTAAGGCCTTTGCTGCAGGTGTGATCCTTGCCACTGGCTTTGTCCACATACTCCCTGATGCATTTGAGAACTTGACTTCACCTTGTTTGAAGGATAACCCTTGGGGCAAGTTTCCCTTCACTGGCTTTGTTGCCATGTTGGCCTCCATAGGGACCCTTATGGTGGACTCATTTGCCACAGGGTTTTACCATAGGCTACACTTTAATCCCTCTAAGCAAGTTCCTACAACTGATGAAGAAATGGGGGATGATCATGTTGGTCACGTACATGTTCATACACATGCCACACATGGCCATGCTCATGGACCATCAACTTTCTCCTCTGAGGGCTCAGTAACACCTGAAGTAATTAGGCAGCGTATCATATCACAAGTGTTGGAGATAGGAATAGTGGTCCATTCAGTGATCATTGGAATATCATTAGGAACTTCAGGGAGCATTGATACCATAAAGCCACTTCTAGTGGCCCTTTCTTTCCATCAATTTTTTGAGGGGATGGGGCTTGGTGGTTGCATCTCTCAGGCAAAGTTTGAGTCAAAGTCTATGGCAATTATGGCTACTTTTTTCTCTCTAACAACTCCAATTGGGATAGCAATTGGAATGGGAGTGTCAAGTGTGTACAAAGAGAATAGTCCAACTGCTTTGGTTGTTGAAGGGGTTTTCAATTCTGCTTCTGCTGGGATTTTGATCTACATGGCATTGGTGGATCTACTAGCAGCAGATTTTATGAACCCAAGGTTGCAGAACAATATGAAGCTCCAATTAGGGGCAAATATCTCTCTTCTTTTAGGTGCAGGTTGCATGTCTCTATTGGCCAAATGGGCTTAA 1098 0.429 MNFLASNSTTTMSKLFYICCCVLIILPTMVLGYSCSCDTEEGNKSDPSEVLHYKLGSIASVLFAGALGVSLPLLSKKIPALNPKNDIFFMVKAFAAGVILATGFVHILPDAFENLTSPCLKDNPWGKFPFTGFVAMLASIGTLMVDSFATGFYHRLHFNPSKQVPTTDEEMGDDHVGHVHVHTHATHGHAHGPSTFSSEGSVTPEVIRQRIISQVLEIGIVVHSVIIGISLGTSGSIDTIKPLLVALSFHQFFEGMGLGGCISQAKFESKSMAIMATFFSLTTPIGIAIGMGVSSVYKENSPTALVVEGVFNSASAGILIYMALVDLLAADFMNPRLQNNMKLQLGANISLLLGAGCMSLLAKWA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01448 365 PANTHER ZINC/IRON TRANSPORTER 19 365 - -
Cca10g01448 365 TIGRFAM zip: ZIP zinc/iron transport family 37 365 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cca10g01448 365 PANTHER METAL TRANSPORT PROTEIN 19 365 - -
Cca10g01448 365 Pfam ZIP Zinc transporter 52 362 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01448 Cca-Chr10 22140192 22142357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01448 8 365 Inorganic Solute Cotransporters AT3G12750 62.363 1.45e-153 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01448 K14709 - gmx:100805124 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01448 10 22140192 22142357 Cca10g01448 10 22140192 22142357 ECH