Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01425 ATGCAGAAACACCAATATTCCATGGAACCTAGAAATGAAGAATTCCATTCTGCACCACAGTTGGTCCCGCAAGACCTTCGGGATAGCATTCTCAATGCACGACCTCCTCCGGCGTATAATGTGTCAGAAAATAAACCTGTTAATTACTCCATACAAACTGGTGAGGAATTTGCTCTCGAGTTTATGAGAGACAGGGTGAATCTCAGGAAGCCTTCCTTTCCAAATGTTGTGGATGATCCCAATTATTCCACAGGCTATATGGAGTTGAAAGGCATTTTAGGCCATACAGGATCTGAAAGTGGATCAGATATTTCTGTGATGACAAAGGTTGAAAAGGGTCCAAAAGAGCTTGACAGAAGAAACTCTTCTCAACATCAGGACAGAAGTAATTATGGTTCAGCTCGATCAATTCCTAGAACTTCATCTAATCAAGACAATTACCGAGTCCTTCATGGTACTGCCTCTTCCATTGCTTCTGAAAGCGCATCAATGAAGATGAAGGTTCTATGCAGCTTTGGGGGTGGAATATTGCCACGGCCTAGTGATGGAAAGCTTAGATATGTTGGCGGTGACACACGTATTATTAGTATTAGAAGGGACATACGTTTTCAGGAGCTTATGCAGAAAGCATCATCAATCTATAGTGAAGTTCATGTGATAAAGTATCAGCTCCCTGGAGAAGATCTTGATGCATTAGTTTCAGTATCTTCTGATGAGGATCTGCGGAATATGATGGAGGAATGTCATGATCTACAAGGCGGAAGAGGATCATCAAAGCTTAGGATGTTTCTGTTCTCTATAAATGATTTGGATGATACTCAGTTTGGTCTTGGAAGCATTGATGGTGATTCCGAAACCCAGTATTTAGTTGCTGTTAACGGGATGGACGTGGGTTCAAGAAACAACTCGATCCTTCGTGGTGAAAACGGCTCTACTAATAACCTACATGAATTGAATGGACAAAATAATGAGAGGGAGACCAACAGACGTCTGATAGACTCATTTGGTGTTAACACTTCTTCCTTGACTGATAATGTTAAATCATCATTGACTATTCAGTCTTCACAACCAATGCTTCCGCCCTCCTCTAATGCTTATGAAACCCATCCATTGTTTTATGATGACCCTGTCATTCACCATGGGGAAGCTGGTCAATATCCACTTCATCATGGTCATGATCCTTCTAACATCTCCGCTCGCAATCTTAGAGAGGTTCCAGTTTCTATGCCCACTCATGGTCTTGTTAACCAAGGAATCATCAATGATGGACAAGCATTCAGTGAGTTGCAGGTACAAATTTCAGATGTGCCAGCAACAATGGTGAGAAAAAAGGGTGATAATTTCATTCATACAGGCAATGACCCAGGAAAAGTTTTTCCCTTGGAATCACCATATCCTGTTCCTTTGCAGCCATTTGAGGGCAATTTGCATGGTAATTTATCAGAGGCATCAGTTACAGCTGCTATATCAGAAGGGCATCATCCTGCACTGCCATCAAAGAACAAGGGTAAGCACCAGCAGTCTGAAGATGCCTCTTCATTAATTAGTAGTATGAATCCCACGCAGACTCCTAAGTCTGGTGAAGATGACTTCTATACTACACCCACTGATGCATTCAGCCGTGCTCATGTTGATGCCGAGTCCAATGTGATTGATTTCAGTTACCTTGAACCACCTGCACTTCCCAACAGATCAGATGATGCTTATGGTTCTAACTTACTCATGTCAGATTTGCTTTCTGACTTCAACCAGAACAATTCAATTACAGAATCCAGTGACATATTGCACAATGACATGTCAAATCTGAACATTGTGTCCAGCTCAGCAGCAAGGCCCTTGCATGCAGATGGCCATACCATTGATGATGGATTTGCCCAACTGCCGACATACAAACAGTTGCCTGATGCAACAAGTAAGGTGACTTCAAAGTTATCACAGCATGTGGATTCTGAGTTGAAGCAAGTGTTGGCAGACAACAAAGTTTCTAGAAATGAGGATCGGGTCCTTAGTTCTGAAAACGAAAACAATCGCTCCAAAGACAACCATAATATTCTCTTAGTTGATGAAGTCAAAGGTACTGAACATCTTGCATTTCATCGGGTTCCTTCTGTTGAATACAATCAAAATCTAGCACCTAAACTTCCTGACCTCAATTTGGCTGAGATTTCTACCAAGGAATCTGATAGTGATACTAAGGTCCAATCTCAGCCCTTTCCTTTAAATGGAAACAAAGGTCAAGATGTTTCTCAAGATTTCCCCCCAGAAGCTAAATCTAGACCTACTCAGGGTGACATTCTGATTGATATTGAAGATAGGTTTCCCCGTGATTTCCTTTATGATATGTTCTCCAAAGCAGTACATACTGAAGATTCCTCGAGCATTGGTCCATTACCAACAGATAGAGCAGGTTTGAGCTTAAACATGGACAATCATGAGCCTAAAAGTTGGTCATATTTTCAGAACTTGGCCCAAGAGGGGTTTGATAATGTTTCTCTAATTGATCAGGATAATCTCGGTTTCTCATCTGCTGTGAGAAAAGTACAAGAGAGGGATAGTAAATCTCAGCAATCTGCTCCTCTACCAGCAGATGGTATTTTGGCAGGAACCAAGGAATCCCACCTAAATTTTGGTGAAGAAAATCAGAAAAATGTACCTGTAACAACTAAAGCAGAAGCCACTGTTTTTCTCCAAAAGTATGAGCATTCCCAACCACAGGGCAATGAAAATAAGAATATGGATGCCATGATGGAAAACATAAGACCACAGGAATCTGAATACCAGGATGGCATGAATGAAACAAGGAATGTGGGTGTAGCAGGGGATTTTGACACCAGTACTGTACAGTTCATAAAGAATGAAGATCTTGAAGAACTGCGAGAGTTGGGTTCTGGTACCTTTGGTACTGTGTACCATGGAAAATGGAGGGGATCAGATGTTGCAATTAAAAGAATAAAGAAAAGCTGCTTTGCTGGTCGATCTTCAGAACAAGAGAGACTGACCATAGAGTTCTGGCGGGAAGCTGACATACTTTCCAAGCTTCACCATCCAAATGTGGTGGCCTTTTATGGTGTAGTTCAGGATGGACCAGGAGCAACGTTGGCGACTGTTACCGAGTACATGGTGGATGGTTCTCTTAGGAATGTTTTGCTTCGTAAGGATAGGTATCTTGATCGCCGCAAGAGGCTGATAATTGCCATGGATGCAGCTTTTGGAATGGAATATTTACACTCAAAAAATATTGTGCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTGAAGGATCCTATTCGGCCAATATGCAAGGTTGGCGATTTTGGTCTATCAAAGATTAAGCGAAATACATTGGTGTCTGGTGGTGTGCGCGGAACTTTACCTTGGATGGCACCGGAGTTGCTAAATGGTAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCTTTTGGCATTGTCTTATGGGAGATCCTTACTGGTGATGAGCCATATGCAAATATGCACTATGGTGCAATCATAGGAGGCATTGTGAATAACACCTTAAGACCTACAATCCCCAATTATTGTGATCTAGAGTGGAAAACATTAATGGAGCAGTGTTGGGCACCAAATCCTTCAGTCAGGCCATCTTTCACAGAGATTGCTCGCCGCTTGCGTGTGATGTCAGCAGCTGCTAGTCAGATGAAAGGGCAGGGCCACAAGGCATCTAAATGA 3714 0.4203 MQKHQYSMEPRNEEFHSAPQLVPQDLRDSILNARPPPAYNVSENKPVNYSIQTGEEFALEFMRDRVNLRKPSFPNVVDDPNYSTGYMELKGILGHTGSESGSDISVMTKVEKGPKELDRRNSSQHQDRSNYGSARSIPRTSSNQDNYRVLHGTASSIASESASMKMKVLCSFGGGILPRPSDGKLRYVGGDTRIISIRRDIRFQELMQKASSIYSEVHVIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQGGRGSSKLRMFLFSINDLDDTQFGLGSIDGDSETQYLVAVNGMDVGSRNNSILRGENGSTNNLHELNGQNNERETNRRLIDSFGVNTSSLTDNVKSSLTIQSSQPMLPPSSNAYETHPLFYDDPVIHHGEAGQYPLHHGHDPSNISARNLREVPVSMPTHGLVNQGIINDGQAFSELQVQISDVPATMVRKKGDNFIHTGNDPGKVFPLESPYPVPLQPFEGNLHGNLSEASVTAAISEGHHPALPSKNKGKHQQSEDASSLISSMNPTQTPKSGEDDFYTTPTDAFSRAHVDAESNVIDFSYLEPPALPNRSDDAYGSNLLMSDLLSDFNQNNSITESSDILHNDMSNLNIVSSSAARPLHADGHTIDDGFAQLPTYKQLPDATSKVTSKLSQHVDSELKQVLADNKVSRNEDRVLSSENENNRSKDNHNILLVDEVKGTEHLAFHRVPSVEYNQNLAPKLPDLNLAEISTKESDSDTKVQSQPFPLNGNKGQDVSQDFPPEAKSRPTQGDILIDIEDRFPRDFLYDMFSKAVHTEDSSSIGPLPTDRAGLSLNMDNHEPKSWSYFQNLAQEGFDNVSLIDQDNLGFSSAVRKVQERDSKSQQSAPLPADGILAGTKESHLNFGEENQKNVPVTTKAEATVFLQKYEHSQPQGNENKNMDAMMENIRPQESEYQDGMNETRNVGVAGDFDTSTVQFIKNEDLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFAGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGATLATVTEYMVDGSLRNVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGDEPYANMHYGAIIGGIVNNTLRPTIPNYCDLEWKTLMEQCWAPNPSVRPSFTEIARRLRVMSAAASQMKGQGHKASK 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01425 1237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1080 1092 IPR008271 GO:0004672|GO:0006468
Cca10g01425 1237 Gene3D - 184 267 - -
Cca10g01425 1237 Pfam PB1 domain 182 265 IPR000270 GO:0005515
Cca10g01425 1237 Gene3D Phosphorylase Kinase; domain 1 941 1041 - -
Cca10g01425 1237 SUPERFAMILY Protein kinase-like (PK-like) 945 1217 IPR011009 -
Cca10g01425 1237 SMART serkin_6 955 1221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g01425 1237 Pfam Protein tyrosine and serine/threonine kinase 956 1218 IPR001245 GO:0004672|GO:0006468
Cca10g01425 1237 PRINTS Tyrosine kinase catalytic domain signature 1189 1211 IPR001245 GO:0004672|GO:0006468
Cca10g01425 1237 PRINTS Tyrosine kinase catalytic domain signature 1037 1050 IPR001245 GO:0004672|GO:0006468
Cca10g01425 1237 PRINTS Tyrosine kinase catalytic domain signature 1074 1092 IPR001245 GO:0004672|GO:0006468
Cca10g01425 1237 PRINTS Tyrosine kinase catalytic domain signature 1145 1167 IPR001245 GO:0004672|GO:0006468
Cca10g01425 1237 CDD STKc_MAP3K-like 961 1218 - -
Cca10g01425 1237 ProSiteProfiles Protein kinase domain profile. 955 1220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g01425 1237 SUPERFAMILY CAD & PB1 domains 181 273 - -
Cca10g01425 1237 MobiDBLite consensus disorder prediction 126 148 - -
Cca10g01425 1237 Gene3D Transferase(Phosphotransferase) domain 1 1042 1237 - -
Cca10g01425 1237 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 84 1237 - -
Cca10g01425 1237 MobiDBLite consensus disorder prediction 729 748 - -
Cca10g01425 1237 MobiDBLite consensus disorder prediction 113 148 - -
Cca10g01425 1237 MobiDBLite consensus disorder prediction 725 760 - -
Cca10g01425 1237 SMART PB1_new 180 267 IPR000270 GO:0005515
Cca10g01425 1237 CDD PB1_UP2 169 265 - -
Cca10g01425 1237 MobiDBLite consensus disorder prediction 508 530 - -
Cca10g01425 1237 PANTHER SERINE-THREONINE PROTEIN KINASE 84 1237 - -
Cca10g01425 1237 ProSitePatterns Protein kinases ATP-binding region signature. 961 986 IPR017441 GO:0005524
Cca10g01425 1237 MobiDBLite consensus disorder prediction 493 534 - -
Cca10g01425 1237 MobiDBLite consensus disorder prediction 657 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01425 Cca-Chr10 21077653 21084350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01425 4 607 MAP Kinase Kinase Kinase AT1G16270 36.508 1.09e-88 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Cca10g01425 PK_Tyr_Ser-Thr 4.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01425 - - gmx:100799118 2115.5