Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01389 ATGTTTCATATGAATGATGTTAAAATGGCCATGATAGTTACTTTGTTATGGTTGTGTCTGCACACTATCGCTTATGCATTGGTGAATAACAGTTTAAGGCCAGGGGAGACATTAGATCACTCAACCACACTATGCTCACCAATGCACAGGTTCTGTTTGAAATTTGGACCTCTTCAATTTGACCCCACTCATACCTACTTAGTGATTCGTAACACACGCACTCCAACCGGATATGCTGATTGGATTGCCAACAGAAATGACCCTATTGACAACAATTCTGGGGTGCTTCTAACACTGAATCATTCAGGTGCTTTAACCATCACAAGTCAAGGTGGGAACCCCATAACTCTCTTCTCACCTCTTCTACCTACCAAAAGAAATGTTGCTGTCACACTTTTGGATTCTGGGAACTTGGTCCTTGGAGAATATGATGCTAGTGGATCCATGAAGCATGTGATGTGGCAAAGCTTTGATCACCCTTCGGATGTGTTGCTACCTGGCATGAAGTTAGGGGTTAATCACAAGACTAATCATACATGGTTGGTTGTGTCATCTTTTTCTACTAACAACCCTTCTTCAGGTTCCTTTGCTCTTGAATGGGAGCCAAGGAATGGAGAATTGGTCATAAAGAGGGGAGGGAAGATATATTGGACAAGTGGTGTTTTGAAAAACAATAAGTTTGAGAATGTTCCAGGGCATATGCAGGTCATGTATGAGTACAAAATTGTCTCAAACAAAGATGAGGAGTCCTTTAGTTATGCAAGTCACAATGATCACTCCCAGTGGGTGCTGTTTAGTAATGGGAATTTGCAGGATACAGAAAATGGAGATATAGCTCAGACTCAAAATTGCTATGGCTACAAAACCAAGGGGGGTTGTGAGATATGGGAGGACCAACCCATGTGTAGGCATTTTGGTGATGTATTTGAAGTACAATCAGGGTACTTTGAGTTGTCTCAAGATAATGATTCTTTGGCTGAAGACAGGAACATTACACTGACTGAAATTGATTGCAAGGATTTTTGTTGGAGCAATTGCAACTGTGTTGGGTTCACAACTTATTTTCCCAATCAGACAGGGTGTAAATATTATTATGGAGGATGGGTGCCTACTTATGTGAAGTATGCTGGATTGAGTGTCAACATTCTTGTAAAGAACAACCAAAATCACAAAGATATGAAGAAGTGGATTATAACTGGTGTTGGTGTAGGATCAACTTTACTCATAATCGGCCTTGGCATTTTCTGTATAAGAATAAGGAGAAGAAGAGCTGCACGTCAAGAGAAGAGAAGCATAAGGGAGAATGACATGCTTAATTTCATGGTGTGTGAGAGATCTAACAGTTTAGCTGAACATCAAAATGAAGTGAAAACTGGGAATGCTTTAAGAATGTTCAGTTATGCATCAATCATGGCAGCTACAAAGAGGTTCTCAGTGGAAAACAAGTTAGGAGAAGGAGGCTTTGGACCTGTATATAAGGGACTGTTAACCCAAAGAGAAGAAATAGCGATAAAAAGACTTTCAAAAGGTTCAGGGCAAGGGGACATTGAGTTTAAAAATGAATTAACTCTCATATCAGAACTCCAACACATGAATCTTGTTCAGTTGTTGGGCTGCTGCATTCATGGAGATGAGAGAATGCTAATATATGAGTATATGCCTAACAAAAGCTTGGACTACTTTTTATTTGATTCAACACAAAGCGGAAAATTAGACTGGAGAAAACGTTTCAACATAATTGATGGGATTGCACAAGGACTTCTCTATCTACATAAGTATTCAAGATTGAGAATTATACACAGAGATTTGAAAGCAAGTAATATTCTTCTTGATGCAAATATGAATCCCAAAATTTCAGATTTTGGCATGGCTAGAATTTTCACACAAGAATCAGATATAAATACTAAAAGGATTGTTGGGACATATGGTTACATGTCACCTGAGTATGCCATGGAAGGAATTTTCTCTTTCAAATCTGATGTTTATGCTTTTGGAGTCTTGCTGCTTGAAATTATAAGTGGAAGAAGAAACAATGTTGAATGGCCACTTAATCTAGTAGGACATGCTTGGGAGCTATGGAAACAAAGTCATCCACTAGACCTGTTAGATCCAACTTTAAGAGAATCATTCAATGAAGATGAAGTGTTGAAATGCATTCATATTGGTCTTCTATGTGTAGAAGAATGTGCAGCTGATCGTCCAAACATTTCAGAGATAATAGTCATGTTGACAAGTGATATTGCCTCATTTCCATTACCAAGAAGACCAGCATTTTACCGTGGAAGAAAGCTGGTTGAGGAATACAGTTCTTCTCTTGATAATGAGACTCTTTCGGTGAATGGTTTAACTGTTACAAGCATAGGTGGAAGGTAA 2373 0.3877 MFHMNDVKMAMIVTLLWLCLHTIAYALVNNSLRPGETLDHSTTLCSPMHRFCLKFGPLQFDPTHTYLVIRNTRTPTGYADWIANRNDPIDNNSGVLLTLNHSGALTITSQGGNPITLFSPLLPTKRNVAVTLLDSGNLVLGEYDASGSMKHVMWQSFDHPSDVLLPGMKLGVNHKTNHTWLVVSSFSTNNPSSGSFALEWEPRNGELVIKRGGKIYWTSGVLKNNKFENVPGHMQVMYEYKIVSNKDEESFSYASHNDHSQWVLFSNGNLQDTENGDIAQTQNCYGYKTKGGCEIWEDQPMCRHFGDVFEVQSGYFELSQDNDSLAEDRNITLTEIDCKDFCWSNCNCVGFTTYFPNQTGCKYYYGGWVPTYVKYAGLSVNILVKNNQNHKDMKKWIITGVGVGSTLLIIGLGIFCIRIRRRRAARQEKRSIRENDMLNFMVCERSNSLAEHQNEVKTGNALRMFSYASIMAATKRFSVENKLGEGGFGPVYKGLLTQREEIAIKRLSKGSGQGDIEFKNELTLISELQHMNLVQLLGCCIHGDERMLIYEYMPNKSLDYFLFDSTQSGKLDWRKRFNIIDGIAQGLLYLHKYSRLRIIHRDLKASNILLDANMNPKISDFGMARIFTQESDINTKRIVGTYGYMSPEYAMEGIFSFKSDVYAFGVLLLEIISGRRNNVEWPLNLVGHAWELWKQSHPLDLLDPTLRESFNEDEVLKCIHIGLLCVEECAADRPNISEIIVMLTSDIASFPLPRRPAFYRGRKLVEEYSSSLDNETLSVNGLTVTSIGGR 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01389 790 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 14 765 - -
Cca10g01389 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Cca10g01389 790 ProSiteProfiles Protein kinase domain profile. 477 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g01389 790 PIRSF SRK 2 306 IPR024171 GO:0004674
Cca10g01389 790 PIRSF SRK 276 790 IPR024171 GO:0004674
Cca10g01389 790 SUPERFAMILY Protein kinase-like (PK-like) 462 768 IPR011009 -
Cca10g01389 790 SMART serkin_6 477 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g01389 790 Pfam Domain of unknown function (DUF3403) 745 790 IPR021820 GO:0004674
Cca10g01389 790 Gene3D - 25 157 IPR036426 -
Cca10g01389 790 Pfam Protein tyrosine and serine/threonine kinase 479 741 IPR001245 GO:0004672|GO:0006468
Cca10g01389 790 SMART blect_4 29 160 IPR001480 -
Cca10g01389 790 ProSiteProfiles Bulb-type lectin domain profile. 29 153 IPR001480 -
Cca10g01389 790 Gene3D Phosphorylase Kinase; domain 1 438 552 - -
Cca10g01389 790 Gene3D Transferase(Phosphotransferase) domain 1 553 749 - -
Cca10g01389 790 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 765 - -
Cca10g01389 790 Pfam D-mannose binding lectin 81 184 IPR001480 -
Cca10g01389 790 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 184 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01389 Cca-Chr10 20088757 20094100 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01389 443 781 Receptor kinase-like Gene Family AT4G11530 55.714 3.23e-127 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca10g01389 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01389 - - aprc:113855562 1019.99