Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01383 ATGCGAAGCTGCATCAGCTTGTGGATCGTTGTGGCACTCGTGGTCCCTGTGCTCCTCTCTCTCAGAAGCCCGCGAGGGGAAACCCAAACCACTCTttctttctccgattcttcttcttccttctccgtcaaccttGCCAACTCTTTCCCCTTCAACCAGCGAATCCGTGACGGCTCCAATCTTCAATACGATTTCTACAGGGACACGTGTCCCCAAGCCGAGACCATCGTGCGTTCCGCGCTCACAAGAATCTACTTCGACCACAGGGACGTTGCGCCGGCTCTGCTGCGTCTCTTCTTCCACGATTGCTTCATCCAGGGATGTGATGCTTCGTTGTTGTTGGATGAGAACAATGGTGATAGGAACCGTTCCGTGGAGAAGCAGGCTGTGCCTAATCAGACGTTGAGAGGTTTTGACAAAATTGACTTGATTAAGAGTGAGGTGGAGCAAGCATGTCCTGGGGTTGTGTCTTGTGCTGACATAATTGCTCTTGCGGCAAGGGATTCCGTTCTTCTGGCTGGTGGACCTTTCTATCCAGTTTTAACAGGAAGAAGGGATAGCCATCAGTCATTTTATGAGGAAGCAACTGATCAGATTCCCAGACCTGATGATAATGTTACACGCACACTGCATCTCTTCAATCTGAGAGGATTCAATGCAAGGGAGACAGTGAGCCTTCTTGGAGGACACAACATTGGGAAAATTGGTTGTGATTTTATTCAGCAAAGGCTGTACAATTTTCAAGGCACAGGACAGGCAGATCCCAGCATACCCCTTGATTTCCTTGGTCAGATGAGGCAAAACTGCCcagacagcaggaacatgagcagcagcagcagcagTGAAGATGAGTTTGTGACCTCAAAGCCAGTGGACAGTGATCATTTTGCTCACTCCAAGATGGGGATTTCATACATGCAAGCACTCTCATCTTCAGTCTCATCAGGAGCAGCATTTGACACTCACTACTATCAGAGCCTGTTGAGAGGAAGAGGACTCCTTTTTGCTGATCAGCAACTCATGGCTGCAGAGAAAACTGCAAGATTGGTCTCTGCTTATGCCTCAGATGATGGATCAACCTTTCGCATGGATTTTGCAAGGGTCATGTTGAAAATGTCCAATCTTGATGTTCTCACTGGACAACAAGTGGTTTCGAGTGGCGTTGCTGCTATGTCAGGCTCAGAAAGTGAAGTTTTGTTGGGTCTTGGCACAACACCTTGGCATAATAATAGGGTGCATCCTCATCGTGCACTTCTTTCAAAGGGTACAGTCCCTCCTTCAGCTCCGAGCAATAAGCACTACTAG 1305 0.4552 MRSCISLWIVVALVVPVLLSLRSPRGETQTTLSFSDSSSSFSVNLANSFPFNQRIRDGSNLQYDFYRDTCPQAETIVRSALTRIYFDHRDVAPALLRLFFHDCFIQGCDASLLLDENNGDRNRSVEKQAVPNQTLRGFDKIDLIKSEVEQACPGVVSCADIIALAARDSVLLAGGPFYPVLTGRRDSHQSFYEEATDQIPRPDDNVTRTLHLFNLRGFNARETVSLLGGHNIGKIGCDFIQQRLYNFQGTGQADPSIPLDFLGQMRQNCPDSRNMSSSSSSEDEFVTSKPVDSDHFAHSKMGISYMQALSSSVSSGAAFDTHYYQSLLRGRGLLFADQQLMAAEKTARLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGQQVVSSGVAAMSGSESEVLLGLGTTPWHNNRVHPHRALLSKGTVPPSAPSNKHY 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01383 434 Gene3D Peroxidase, domain 2 200 300 - -
Cca10g01383 434 Gene3D - 65 199 - -
Cca10g01383 434 PRINTS Haem peroxidase superfamily signature 174 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PRINTS Haem peroxidase superfamily signature 222 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PRINTS Haem peroxidase superfamily signature 312 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PRINTS Haem peroxidase superfamily signature 156 173 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PRINTS Haem peroxidase superfamily signature 92 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PANTHER PEROXIDASE 65 382 - -
Cca10g01383 434 MobiDBLite consensus disorder prediction 270 289 - -
Cca10g01383 434 ProSitePatterns Peroxidases active site signature. 92 103 IPR019794 GO:0004601
Cca10g01383 434 MobiDBLite consensus disorder prediction 270 286 - -
Cca10g01383 434 Pfam Peroxidase 77 356 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PRINTS Plant peroxidase signature 155 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PRINTS Plant peroxidase signature 221 233 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PRINTS Plant peroxidase signature 70 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PRINTS Plant peroxidase signature 136 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PRINTS Plant peroxidase signature 326 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PRINTS Plant peroxidase signature 367 380 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PRINTS Plant peroxidase signature 94 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PRINTS Plant peroxidase signature 310 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PRINTS Plant peroxidase signature 174 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 PANTHER PEROXIDASE 25-RELATED 65 382 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 CDD secretory_peroxidase 60 382 IPR033905 GO:0004601|GO:0042744
Cca10g01383 434 Gene3D - 373 382 - -
Cca10g01383 434 SUPERFAMILY Heme-dependent peroxidases 60 382 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca10g01383 434 Gene3D Peroxidase, domain 2 313 372 - -
Cca10g01383 434 ProSiteProfiles Plant heme peroxidase family profile. 60 387 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01383 Cca-Chr10 19894360 19897931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01383 3 380 Peroxidase AT4G33870 42.711 4.68e-95 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01383 K00430 - gmx:100804973 643.269