Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01342 ATGGAGCGAAGACAGAATCAAACTCCACAAGGCCAAATAGCTAGGGTTTTGGTTGAATTTTTGGAGGTGGCTATTACTGATGTCGTTTTTCTCAAAGGGGTTTATCCTTCTGGTGCCTTTGAGCGGAGAAGGTATATGAATGTGGTGGTTCAAAGGGCTCGTCATCCTCAGCTTAGATATTACATACATGCTACTGTTTCAGGGCTTCTACCCTTTATAGAAAAGGGAATGGTGGAAAGAGTAGCAGTTATTTTCTTCAATGCTGACAATGTTCCATTGGAAAAATTCGTATTCAAGCTTACAGTGAACCAATCTTATGGTTCAGAAGTGGAAGAGGTTGATCTTGAGCTCTCTCTCAGATCATTTCTGATCAAACTGTCAAACTCAGAATCTCTTTCTAAAGGGATTCCTCCTGATAGCAGGTGGGAGATAACTGCTTACTTTCGATCCCTTCCAGAAACTGGTACAAGCAAGGAAGCAGACTTGTGGATCCCAACTGACACAAAACAGTGGCAGCAGCCTCCACTTATCACCCCTATCAAGTCAATGAGTAGTGAACCTCTGTGTTTGCAATTGTACTTGGAGCATCAAAGTTTATCAGAATCATTGCTTTGA 615 0.4195 MERRQNQTPQGQIARVLVEFLEVAITDVVFLKGVYPSGAFERRRYMNVVVQRARHPQLRYYIHATVSGLLPFIEKGMVERVAVIFFNADNVPLEKFVFKLTVNQSYGSEVEEVDLELSLRSFLIKLSNSESLSKGIPPDSRWEITAYFRSLPETGTSKEADLWIPTDTKQWQQPPLITPIKSMSSEPLCLQLYLEHQSLSESLL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01342 204 SUPERFAMILY The spindle assembly checkpoint protein mad2 8 194 IPR036570 -
Cca10g01342 204 PANTHER MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2B 1 199 - -
Cca10g01342 204 Pfam HORMA domain 18 111 IPR003511 -
Cca10g01342 204 Gene3D HORMA domain 5 198 IPR036570 -
Cca10g01342 204 ProSiteProfiles HORMA domain profile. 11 194 IPR003511 -
Cca10g01342 204 PANTHER MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2 1 199 IPR045091 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01342 K13728 - qsu:111992245 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01342 10 18500499 18505046 Cca10g01342 10 18500499 18505046 ECH