Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca10g01335 | ATGCTCCATCACACACCTTTGCCATTAGATAAAGAGATTGGATTTCAGGGGGAGAACAACGTTGATGATACGATATCTCCTCCATTTCTAGTTCGTTCAAATGAATTCAAAGAGGGGACCCCTTCATTTACATGGACTTCTCACATTCCGTCTTCCAATACACTTGCCACGCCCCAATATCCACTGGCCCACTTGATTCTGAACGCAAAGGAAAAACCTAGCTACTCCGAATCCATAAATAAGAAGAGGACGCCACGAAGCAAGATTTGTTCGAGCTTCAATTTACCGGAGAGGAACGTGCTTTGCTCGAGCAAAATTCGTCACTCTAGTTGCACTGTGCATCACTCGGAACCAATCGTCAAAATGTCGCGGAAGGGTTTGATGGAACAAGATCTGAGTAAGTTGGATGTTACAAAATTGCATCCACTTTCTCCAGAAGTCATATCACGTCAGGCTACTATTAATATCGGTACTATAGGTCATGTGGCACATGGCAAGTCAACAGTTGTGAAAGCAATATCAGGCGTGCAGACTGTCCGTTTCAAAAATGAGTTGGAGCGTAACATTACAATCAAGCTTGGCTATGCAAATGCAAAAATATACAAGTGTGAAGATGAACGGTGTTCTAGGCCTATGTGCTACAAGGCTTATGGAAGTGGAAAGGAAGATAACCCTATGTGTGATGTGCCAGGGTTTGAAAACTCTAAGATGAAATTGCTGAGACATGTTTCATTTGTGGATTGCCCAGGACATGATATTCTCATGGCTACAATGCTTAATGGAGCAGCTATCATGGATGGAGCTTTGCTACTCATAGCTGCCAATGAAAGCTGCCCACAACCACAAACCTCTGAGCATTTAGCTGCTGTGGAAATTATGCGTCTACAGCACATAATAATCCTTCAGAATAAGGTAGACTTGATTCAAGAAAATGTGGCAATCAATCAGCATGAAGCAATTTCAAAGTTTATACAAGGAACTGTTGCTGATGGTGCACCAGTAGTGCCTATTTCAGCACAGTTGAAGTATAATATTGATGTTGTGTGTGAGTATATTGTGAAGAAGATTCCAATTCCTGAAAGGAACTTTATTTCTCCACCTAATATGATAGTAATTCGGTCATTTGATGTCAATAAGCCTGGTTTTGAGGTTGATGAGATAAAAGGAGGTGTGGCTGGTGGAAGCATCCTCAGGGGTGTTTTGAAGGTCAATCAATTCATTGAAGTTCGACCTGGAATTGTTGTTAAAGATGAGAGTGGAAATATCAGATGCACACCTATATACTCGAGAATAGTTTCATTGTATGCTGAACAAAATGAGCTTCAATTTGCTGTGCCTGGAGGCCTAATTGGTGTTGGGACAACAATGGATCCCACTTTGACACGTGCTGATAGGTTGGTAGGTCAAGTTCTAGGAGAGGTTGGATCACTGCCTGAGGTTTTTGTTGAACTTGAGGTTAACTTTTTCTTGCTTCGACGGCTTCTTGGTGTCCGGACAAAAGGCTCAGAGAGACAGGGAAAGGTATCTAAGCTTGCCAAAGGAGAGATGTTAATGTTGAACATAGGATCAATGTCAACGGGGGCTAGAGTTATTGCTGTGAAGAATGATTTGGCGAAGTTACAACTTACTTCCCCTGTGTGCACCAGCAAGGGTGAGAAGATTGCACTTAGTCGACGTGTGGAGAAGCATTGGCGTCTTATTGGGTGGGGCCAAATTCAAGCAGGAATCACTCTTGATGTCCCTCCTGCTCCCCATTTGAGTTGA | 1764 | 0.4274 | MLHHTPLPLDKEIGFQGENNVDDTISPPFLVRSNEFKEGTPSFTWTSHIPSSNTLATPQYPLAHLILNAKEKPSYSESINKKRTPRSKICSSFNLPERNVLCSSKIRHSSCTVHHSEPIVKMSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCSRPMCYKAYGSGKEDNPMCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAISKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFISPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKGEMLMLNIGSMSTGARVIAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGITLDVPPAPHLS | 587 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca10g01335 | 587 | CDD | eIF2_gamma_II | 362 | 475 | IPR044127 | GO:0000049 | |
Cca10g01335 | 587 | Pfam | Initiation factor eIF2 gamma, C terminal | 483 | 572 | IPR015256 | - | |
Cca10g01335 | 587 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 151 | 360 | IPR000795 | GO:0003924|GO:0005525 | |
Cca10g01335 | 587 | Pfam | Elongation factor Tu GTP binding domain | 153 | 357 | IPR000795 | GO:0003924|GO:0005525 | |
Cca10g01335 | 587 | Pfam | Elongation factor Tu domain 2 | 389 | 471 | IPR004161 | GO:0005525 | |
Cca10g01335 | 587 | CDD | eIF2_gamma_III | 478 | 572 | IPR015256 | - | |
Cca10g01335 | 587 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 | 122 | 584 | - | - | |
Cca10g01335 | 587 | Gene3D | Translation factors | 478 | 576 | - | - | |
Cca10g01335 | 587 | Gene3D | Translation factors | 364 | 477 | - | - | |
Cca10g01335 | 587 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER | 122 | 584 | - | - | |
Cca10g01335 | 587 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 144 | 363 | IPR027417 | - | |
Cca10g01335 | 587 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 476 | 573 | IPR009001 | - | |
Cca10g01335 | 587 | PRINTS | GTP-binding elongation factor signature | 298 | 307 | IPR000795 | GO:0003924|GO:0005525 | |
Cca10g01335 | 587 | PRINTS | GTP-binding elongation factor signature | 244 | 254 | IPR000795 | GO:0003924|GO:0005525 | |
Cca10g01335 | 587 | PRINTS | GTP-binding elongation factor signature | 260 | 271 | IPR000795 | GO:0003924|GO:0005525 | |
Cca10g01335 | 587 | PRINTS | GTP-binding elongation factor signature | 155 | 168 | IPR000795 | GO:0003924|GO:0005525 | |
Cca10g01335 | 587 | Gene3D | - | 151 | 361 | IPR027417 | - | |
Cca10g01335 | 587 | CDD | eIF2_gamma | 154 | 361 | IPR044128 | GO:0005525 | |
Cca10g01335 | 587 | SUPERFAMILY | Translation proteins | 361 | 475 | IPR009000 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca10g01335 | Cca-Chr10 | 18374728 | 18384811 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca10g01335 | 122 | 584 | Eukaryotic Initiation Factors Gene Family | AT1G04170 | 90.733 | 0.0 | 877 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca10g01335 | K03242 | - | gmx:100805852 | 913.679 |