Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01325 ATGTTTGTGCAGGCGATGGGAAAATCAAACCCTCATGTTGTTCAGATAGAGGGGTTTAGGCTTGCTCAATGTCTATTGAGATCCCAAGAAAATTGTTTAAAAGTGGTTGGTTTGTGTGGTGAAGCTCTTGTTGATGCCATAATTCGTGGGATGAGAGAAACTGGGTTGAGTTCTAAAAAAATTGGGAACAACCATGGGTTTTTGTCAGTGGAAGCATGCCAGTTGGCTCTAATAACTCGTTGGGCAGGTGATCATCATATTAATTTTTGGAAAAAAGGAATTGACAAAGTCCTCCTTAATCTTCTGATTGGAAATATTCAAGACCAATTGTCTGAACCTGTCTTGTCAATGGAAAAACAAATAACCATGGCGAAAGAGGGATTAAAAGCCAATTATAATTTTGGTCTTAGGAGTTATGTGTGGGACATTCTTGGGTGGCTTACAATTCACTGTGGAGAAAATTTAAACCCTTACACCCATGGAAATGAGCTCTGCATCAACTTACTAATTACATGTGCATGCTTGAGTTTTGTGGATACACTTGAAAAATGGTGCCGAATATGTCAAAAGGATATTGATAATCATTTTCAAAGTGAACCAGTATCGAGGGCTGTTCTAATGATGATTCATTCTCCATGTAATACCATCTCCTCACATACTAGATTCTTATTGTCAGATTTACTGAAGGTGAAGGGCGTGCCATGCTTTAAAAGCTTAATACATACTCTAGATTATACATCATCTTTGGAAAGCTATGGATCATTTGATAAACTTCAACTGGTTATTAATTTAATTGGGTTGCTTTGTCTTTCAAGTTTACCACAATATCAAAGATGTCTTGTTGAGAGCAAAGGGATAAAGGCAATTGTTCTTCTTGTGAAACGATGCTTATGTAATGACATTCATGTAGAAAGGCATACAGCAGGCCTTGAAAGGTCTTGTTGCTGTTTTGGTGAAGAAGATTGGGAAGGTTCCAATGTTCTCTTATTTTATAGTTTGTTGGGCTTAACTGAAATCCTTCATCAGTGTGACCTTCTACGAGATGATCCTCAGCAATTTTCTAGAGAGGTGACAAACATTAGAGCTCAGTTAGTTAGCAAACTTAATGAGATCTGTAGCAACAACTCTTTCAGTCCTGGGGTGAGATGGTATGTATCTTATATTCTAACTTATTTTGGATGCTACGGGTTCCCAAACAAATTAGCCAAAAGGATTGGGAAATCACTCAATAAGGAAGAATACTCTGATATGAAGCTTGTTGTAGCAAATGGGGATTGTATGAGTGTTCATATTGTTATTCTTGCTGTTCGCTGTCCATCACTGCTGCCTCCTCAATTGTTACCTAGTAGGAAGAGTACTGAAGCGGTAACAGATAAGTTTGTTGGAGAGACCATGAGAGAAGTTCGATTATCTTCTCATGTTGATTATGAAGCATTGGTGTTGTTATTGGAATATGTGTACTTGGGATGCTTACATGCAGCAGAAGAAACAGTAAAGAAGCTGAAAATCCTTGCTAAGCGCTGCAATCTACAGCCTCTCTTGCAAATGCTTAATAGACAACATCCAAAGTGGGGCACACCTTTCCCCAGCTATAATCTTACTTCAGCTCTTGGTTCAGCTGGAAGTTGTTTTTCGGATGTCATGTTGGTAGCTAAATCAACTGAACTTGTTGGGTGGACATGCAATATTTGTTCTGACAAAGTACCCCATATGCATGTTCATAAAGTCATATTGCAGGCTGGTTGTGATTATTTACAAGGTTTGTTCCGGTCAGGAATGCAAGAAAGTCATTCACAAGTCATAAAAGTTGATATTAGCTGGGAAGCATTGGTTAAATTAGTGCAGTGGTTTTATTCTGATGAGCTGCCTAATCCTCCCTCTGGATGTGTGTGGGATAATATGGATGATGAAGAAAAGCTATTTAATCTACAACCATATGTGGAGCTTTGTTGGCTTGCTGAGTTCTGGATTTTGGAAGATATTCAGGAAGCCTGCTGGAATGTGATAATGTCTTGTCTTGATTCTTCCAGGCAACTGTCCATTAAAATAATCAACATGGCTTATAATCTCTCTTTGTGGAAGTTGGTTGACATTGCCGCAAATCTCATTGCTCCTTCATATCGTCAATTACGAGATTCGGGAGCTAAAACCTGCCACATTAGGCAACTGAAGGACCTGAGGTGGATATTTCTCTTTCAACATAGTGTATTTCAATCCCAAGGTAAAATGATCGAGGAACATGGAACAGCAATCGGGATAATTTCATGCGCCTAA 2274 0.3879 MFVQAMGKSNPHVVQIEGFRLAQCLLRSQENCLKVVGLCGEALVDAIIRGMRETGLSSKKIGNNHGFLSVEACQLALITRWAGDHHINFWKKGIDKVLLNLLIGNIQDQLSEPVLSMEKQITMAKEGLKANYNFGLRSYVWDILGWLTIHCGENLNPYTHGNELCINLLITCACLSFVDTLEKWCRICQKDIDNHFQSEPVSRAVLMMIHSPCNTISSHTRFLLSDLLKVKGVPCFKSLIHTLDYTSSLESYGSFDKLQLVINLIGLLCLSSLPQYQRCLVESKGIKAIVLLVKRCLCNDIHVERHTAGLERSCCCFGEEDWEGSNVLLFYSLLGLTEILHQCDLLRDDPQQFSREVTNIRAQLVSKLNEICSNNSFSPGVRWYVSYILTYFGCYGFPNKLAKRIGKSLNKEEYSDMKLVVANGDCMSVHIVILAVRCPSLLPPQLLPSRKSTEAVTDKFVGETMREVRLSSHVDYEALVLLLEYVYLGCLHAAEETVKKLKILAKRCNLQPLLQMLNRQHPKWGTPFPSYNLTSALGSAGSCFSDVMLVAKSTELVGWTCNICSDKVPHMHVHKVILQAGCDYLQGLFRSGMQESHSQVIKVDISWEALVKLVQWFYSDELPNPPSGCVWDNMDDEEKLFNLQPYVELCWLAEFWILEDIQEACWNVIMSCLDSSRQLSIKIINMAYNLSLWKLVDIAANLIAPSYRQLRDSGAKTCHIRQLKDLRWIFLFQHSVFQSQGKMIEEHGTAIGIISCA 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01325 757 SUPERFAMILY POZ domain 543 670 IPR011333 -
Cca10g01325 757 CDD BTB_POZ_ZBTB_KLHL-like 544 622 - -
Cca10g01325 757 PANTHER OS06G0674800 PROTEIN 1 715 IPR044953 -
Cca10g01325 757 Gene3D Potassium Channel Kv1.1; Chain A 540 713 IPR011333 -
Cca10g01325 757 ProSiteProfiles BTB domain profile. 545 626 IPR000210 GO:0005515
Cca10g01325 757 Gene3D Potassium Channel Kv1.1; Chain A 397 520 IPR011333 -
Cca10g01325 757 SMART BTB_4 415 525 IPR000210 GO:0005515
Cca10g01325 757 SMART BTB_4 545 673 IPR000210 GO:0005515
Cca10g01325 757 Pfam BTB/POZ domain 570 636 IPR000210 GO:0005515
Cca10g01325 757 Pfam BTB/POZ domain 407 516 IPR000210 GO:0005515
Cca10g01325 757 ProSiteProfiles BTB domain profile. 415 495 IPR000210 GO:0005515
Cca10g01325 757 SUPERFAMILY POZ domain 395 516 IPR011333 -
Cca10g01325 757 Coils Coil 491 511 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Cca10g01325 BTB 3.3e-08 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01325 - - gsj:114385670 1268.06