Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01293 ATGGGAGATGAGGTGATTTTGTTGAATTTCTGGGTTAGCCCTTATGGGATTAGGGTCCGAATTGCACTAGAGGAAAAGGGCATCAAGTATGAGAATAGAGAAGAGGATGTCAACAAGAAGAGCCCTTTGCTCCTGCAAATGAACCCAGTTAATAAGACAATACCAGTTCTCATTCACAATGGCAAACCCATCTGTGAGTCACTTATAGCTGTTGAGTATATTGATGAGGTTTGGAATGATAAGTCTCCCTTGTTGCCTTCTGATCCTTACCAGAGATCACAAGCTAGATTCTGGACTAACTATGTTGACACCAAGATGTATGAGATTGCCGTGAAGATTTGGAAAAGTGAAGGAGAAGAGAAAGAAGCTGCCAAGGAAGAATTCTTGGAGTGTCTGAAGTTAATTGAAGAACAACTGGGGGACAAGCCTTATTTTGGTGGGGACAACCTTGGTCTTTTGGATATTGTACTTGTTCCTTTGATCTGTTATACTTATACCTATAATATATATGGAAATTTCATCAACGAGACACAGTACCCCAAAATCATTGCTTGGTCTAAGAGGTGCGCACTAAAAGAGACTGTGTCCAAGTGTCTTCCCGAGGAACAGAGGGTCAAAGAGGTTTTTTCGAAGAGGAGACAGGACTTGAACAAATGA 657 0.4125 MGDEVILLNFWVSPYGIRVRIALEEKGIKYENREEDVNKKSPLLLQMNPVNKTIPVLIHNGKPICESLIAVEYIDEVWNDKSPLLPSDPYQRSQARFWTNYVDTKMYEIAVKIWKSEGEEKEAAKEEFLECLKLIEEQLGDKPYFGGDNLGLLDIVLVPLICYTYTYNIYGNFINETQYPKIIAWSKRCALKETVSKCLPEEQRVKEVFSKRRQDLNK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01293 218 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 210 - -
Cca10g01293 218 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Cca10g01293 218 CDD GST_N_Tau 5 78 - -
Cca10g01293 218 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
Cca10g01293 218 Coils Coil 206 218 - -
Cca10g01293 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cca10g01293 218 SFLD Main.3: Omega- and Tau-like 3 216 IPR045073 -
Cca10g01293 218 Pfam Glutathione S-transferase, C-terminal domain 120 188 - -
Cca10g01293 218 Gene3D Glutaredoxin 1 87 - -
Cca10g01293 218 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Cca10g01293 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Cca10g01293 218 SFLD Main (cytGST) 3 216 - -
Cca10g01293 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 210 IPR045073 -
Cca10g01293 218 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Cca10g01293 218 Gene3D - 88 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01293 Cca-Chr10 17710595 17711900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01293 1 214 Glutathione S-transferase Gene Family AT1G78380 54.673 1.34e-90 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01293 K00799 - gmx:100776076 360.918