Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01291 ATGGGAGATGAGGTGATTCTATTGAATTTCTGGTTAAGCCCTTATGGGATGAGGGTCCGGATTGCACTAGAGGAAAAGGGCATAAAGTTTGATAATAGAGAAGAGGACTTAAGCCACAAGAGCCCTTTGCTTCTGCAAATGAACCCAGTTCATAAGAAAATTCCGGTTCTCATTCACAATGGCAAACCAATTTGTGAATCACTCATTGTTGTTGAGTATATATATATTGATGAGGTTTGGAATGATAAGTCTCCCTTGTTGCCTTCTGATCCTTATCAGAGATCACAAGCTAGATTCTGGGCTAACTATGTTGACACCAAGATGTATGAGATTGCCTCGATGATTTGGAGAAGTGAAGGAGAAGAGAAAGAAGCTGCCAAGGAAGAATTCTTGGAAGGTGTACAGTTATTGAAAGAACAACTGGGGGACAAGCCTTATTTTGGTGGAGACAACCTTGGCCTTGTGGATGTTGCACTTATTCCTTTCATATGTTATTATCATAACTATAATATATGTGACAATTTCATCAACGAGGCACGGTGCCCCAAAATCATTGCTTGGTCCAAGAGTGTATACTATTCTTTCCATGGACGCCCCCACTCCAATCACCACCTCCCTCCACTGAACGCCCTCGCCGTCTACGACCTTcgctcccgctaccgcctcttcctctccccgctcccctcTAAAGACGTTGACGTGACAAACGATGTCGCCGTGGACCACTATGGCAACGCGTTCGTGATGAACTCCAGCGAAAACTTCATTTGGAAGAATCCTTCCAACGGCAACGCACCTTACGGTTTCGTAGGGTTGAATGGAATCGCCTACGTGAGCAAGAGATACCTCTTAGTGGTGCAATCAAGCAGCGGGAAGGTTTTCAAGGTAGACGCAGTGGACGACACAATGAGGAAGGTGTTGTTGAACGAGGATCTAGTAGGCGCGGAAGACATTGCGGTGAGGAAGGACGACGTGGCGGAGGTGATTTCACCGATGAAGGTACTGTGGTTGATGAAGAGCGATGATAACTAA 1032 0.4331 MGDEVILLNFWLSPYGMRVRIALEEKGIKFDNREEDLSHKSPLLLQMNPVHKKIPVLIHNGKPICESLIVVEYIYIDEVWNDKSPLLPSDPYQRSQARFWANYVDTKMYEIASMIWRSEGEEKEAAKEEFLEGVQLLKEQLGDKPYFGGDNLGLVDVALIPFICYYHNYNICDNFINEARCPKIIAWSKSVYYSFHGRPHSNHHLPPLNALAVYDLRSRYRLFLSPLPSKDVDVTNDVAVDHYGNAFVMNSSENFIWKNPSNGNAPYGFVGLNGIAYVSKRYLLVVQSSSGKVFKVDAVDDTMRKVLLNEDLVGAEDIAVRKDDVAEVISPMKVLWLMKSDDN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01291 343 Gene3D - 90 216 - -
Cca10g01291 343 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cca10g01291 343 Pfam Glutathione S-transferase, N-terminal domain 5 74 IPR004045 -
Cca10g01291 343 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 208 IPR010987 -
Cca10g01291 343 SFLD Main (cytGST) 3 192 - -
Cca10g01291 343 Pfam Glutathione S-transferase, C-terminal domain 122 189 - -
Cca10g01291 343 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 191 - -
Cca10g01291 343 Gene3D Glutaredoxin 1 89 - -
Cca10g01291 343 SUPERFAMILY GST C-terminal domain-like 78 191 IPR036282 -
Cca10g01291 343 CDD GST_N_Tau 5 80 - -
Cca10g01291 343 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Cca10g01291 343 CDD GST_C_Tau 91 189 IPR045074 GO:0004364|GO:0006749
Cca10g01291 343 Gene3D - 218 331 IPR011042 -
Cca10g01291 343 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 191 IPR045073 -
Cca10g01291 343 SUPERFAMILY NHL repeat 210 323 - -
Cca10g01291 343 SFLD Main.3: Omega- and Tau-like 3 192 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01291 Cca-Chr10 17693443 17695321 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01291 1 196 Glutathione S-transferase Gene Family AT1G78340 58.416 1.20e-84 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01291 K00799 - gmx:100776076 318.546