Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01285 ATGGTTATGGCATATAGGAGCATCAACTTGGTGATTCATCAGGGGTCAATGTCGCCCCATGAATTCCCTGTAGCTTCTCAACTGAGACCTGCAAGCTTTCATCCGTTTTCTTCAACTTGGGTTATTACCAATGGAGCCCTTAATGTGTCACCACTAAGGTGGAGCTACAATGCTTCTTCTTGTTATTGCTTCCGTTTGAGGGAGTGCAGATGCAAGTGGAAACGGCTTGTCAGAAGCTGTTCCACCAGTGAGTTTGTTGTTGCCAGTGATGAAAATTATGGCAACAAGCAGGTTGTTAGCCTCACTCCCCGCCTCTACGAATATGTCCTCAAAAATGTTCGAGAGCCAGAGATTCTAAGGCAATTGCGAGGGGAGACGGCCTCTATGCGTGGAAGTCAGATGCAGGTGTCCCCTGATCAGGCACAGCTGCTAGCAATGCTTGTGCAGATTCTTGGAGCAGAACGGTGTATTGAAGTTGGTGTTTATACTGGATACTCATCTCTAGCCATAGCATTAGTTCTGCCGGAATCAGGTCGTTTAGTTGCCTGTGAAAGAGATGCCAAATCTCTTGATGTTGCCAAGAAGTATTATCAGCTAGCTGGTGTTTCACATAAGGTGGATGCAAAACTTGGACTTGCAATGGATTGCCTAGAATCTTTAATTCTGAATGGTGAAGCAGGAAGTTATGATTTTGCGTTTATTGATGCTGAGAAAAAAATGAACGAGAAATATTTTGAACTGCTGCTACAGCTGGTGAGGGTTGGAGGTCTTATTGTAATTGATAATGTCCTTTGGCATGGAAAAGTTGCTGACCCATTGGTATATGACCCTAAAACTATCAGCATTAGAAATTTTAATCAAAAGTTAATGGAAGACAAGCGTGTAAGCATCAGTATGGTACCTATTGGAGATGGGATGACAATCTGCCGAAAAAGATGA 939 0.4334 MVMAYRSINLVIHQGSMSPHEFPVASQLRPASFHPFSSTWVITNGALNVSPLRWSYNASSCYCFRLRECRCKWKRLVRSCSTSEFVVASDENYGNKQVVSLTPRLYEYVLKNVREPEILRQLRGETASMRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGRLVACERDAKSLDVAKKYYQLAGVSHKVDAKLGLAMDCLESLILNGEAGSYDFAFIDAEKKMNEKYFELLLQLVRVGGLIVIDNVLWHGKVADPLVYDPKTISIRNFNQKLMEDKRVSISMVPIGDGMTICRKR 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01285 312 Gene3D Vaccinia Virus protein VP39 95 312 IPR029063 -
Cca10g01285 312 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 312 IPR029063 -
Cca10g01285 312 PANTHER O-METHYLTRANSFERASE-RELATED 83 312 - -
Cca10g01285 312 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 83 312 - -
Cca10g01285 312 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 95 312 IPR002935 GO:0008171
Cca10g01285 312 CDD AdoMet_MTases 155 260 - -
Cca10g01285 312 Pfam O-methyltransferase 113 311 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01285 Cca-Chr10 17573108 17579114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01285 74 300 Monolignol Biosynthesis Gene Families AT3G62000 75.652 7.00e-126 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01285 - - gmx:100776619 557.755