Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01283 ATGCTATTGCTACGAAAATCCAAATGTCCTACCCAGGGTGCGCTGTTGCTGCGAAATCACGAAGACATTGCGAATAAAACAAAGTTGCATTACGCTGCACTACGAAATCGCGAAGAGCCAAAGACGTCGCGAACAACTTGCACGGATGAATATGATAAGCCATTCTTTGTTCTTCATAAAGCTTCATCCCGGAGAAAAGATAGAGCACCAACAACACATACAAAATTATGCAAGAGAAATAAGTTATCTTCATCATCACCTAAAAGTGTGAAGCAACTGGAAGGAAGCGTGACCAAAGAATGTGATCACCATTTGTTTCAGCAACCGCAAATTGAAGCTTTTGACATTGTTTGGGCAAAGATTGAATCTTCCATTAAGGATGTTTTAAGAGATCTCAATACTAGTGTATTTCATGATATTCAACAATGGGTTCTGGAGTGCTTCAATGCTACTAAGTTGTTTGAAGAACCTACTATTTCTGAAGCAACTCGGTCTTTTCTTGTTCTAAATAATACTCCTGGGAAGCTGTTCACTGCGCTAGTCAGTACCTACCACGTTGATGGCAAAATGATAAGTATCAGGAGGAAGTGGAGTTTGTTGGTAACAAAGACAAATGGCAAAGAAAGGATAGTCCTTTCTTATACTAGAGGCACCAAACTGATGGCATTTGGTATACCTTATATACCTTACATCCTTAAGGTAGTTGGCTTTCTTTTCCTTTTCCTTGTAGATGAAGTGCTACACAACCTTGAGTGTGGACTCAACTTGGAAGAATTTAGTCCAAGGTTGGATCTAGCATGCTCATTTGGGTCCACCAATCATGGAAGGAAGATTGTGAGGGGTCCCCTCATTACTTAA 858 0.4021 MLLLRKSKCPTQGALLLRNHEDIANKTKLHYAALRNREEPKTSRTTCTDEYDKPFFVLHKASSRRKDRAPTTHTKLCKRNKLSSSSPKSVKQLEGSVTKECDHHLFQQPQIEAFDIVWAKIESSIKDVLRDLNTSVFHDIQQWVLECFNATKLFEEPTISEATRSFLVLNNTPGKLFTALVSTYHVDGKMISIRRKWSLLVTKTNGKERIVLSYTRGTKLMAFGIPYIPYILKVVGFLFLFLVDEVLHNLECGLNLEEFSPRLDLACSFGSTNHGRKIVRGPLIT 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01283 285 MobiDBLite consensus disorder prediction 64 89 - -
Cca10g01283 285 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 57 183 IPR020795 GO:0003677|GO:0005664|GO:0006260
Cca10g01283 285 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 57 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01283 Cca-Chr10 17549223 17555395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01283 48 187 Core DNA Replication Machinery Family AT5G16690 38.732 9.43e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01283 K02605 - gmx:100780646 203.756