Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01219 ATGTCTATGGATTATTCCATAATAATTAGTTTACTTCTTCTCTTTTCATGCACTACAATACACGTTCTCTCAAACACAATAAGAAGAAAACGAAACCACAATCTTCCACCAGGACCTTCTCCTCTTACCCTAGTGAGAAACCTAGTTGAACTTGGCAAAAAGCCACAACAAACACTAGCCAAACTTGCCAACCTTCATGGCCCCATAATGCGTTTGAAGCTAGGTCAACTAACCACCATAGTTATCTCTTCACCAAACATATCCAAAGAAGTGTTCCAAACCCATGACTTGTTATTCTCAAACCGAACAATTCCACATGCCACAACGGTTCACAACCATAGCCATAATAGTGTAGCTTTTCTCCCCATTTCACCTCTTTGGCGAGACCTTAGGAAAATATGCAATAACCAATTGTTCTCCAACAAGTCCCTCGATGCAAGCCAAAACCTTAGACGCAAAAAATTGCATGAACTTCTCAATCACGTACATGCATGCAGCCTTAGGGGTGAAGCAGTGGACGTTGGAACCGTGGCTTTTAGGACTTCGATTAATTTTTTGTCGAACATTTTTTTCTCTATGGATTTTGTTAACAATGAAGATGAAAGTGAAGAGTACAAGGGCATAGTGGAGAATCTTGCAAGAGTGATTTCAACGCCGAATTTGGAGGATTTTTTGGCGTTGTTGAAGATGGTTGATCCACAAGGCATTAGAAGACGAGCAACTACTTACGTTTCAAAGTTGTTCGCTATTTTTGATCGATTGATAGATAAACGATTGGAGTTGGGTGTAAGTAATGATGACATGTTAGACACGTTGCTCAACATATCTCAAGAGAATGGCCAGAAGATGGACACCAAAAAGATCAAACATTTATTTCTGGATTTAATTGTTGCTGGAACCGATACCACTTCCTACACAACGGAATGGGCAATGGCTGAACTAATCAATAACCCAAATGCAATGTCAAAAGCCAAAAGGGAGCTTGAGCAAACTATTGGAATAGGCAATCCAATTGAAGAATCAGACATTACAAGACTCCCATATTTGCATGCAATAATAAAAGAAACATTACGCTTGCATCCTGGGGCCCCACTTTTGCTACCTCGACAAGCCAACATTGATGTAGAGATCAATGGCTACACTATTCCACAAGGTGCACAAATTGTAATTAATGAATGGGCTATTGGAAGGGACCCTAGCATATGGGATAACCCTACTTCATTTTCACCTGAGAGATTTTTGGGTTCAGAAATTGATGTCAAAGGTCGACATTTTCAGCTCACACCGTTTGGTGGTGGGCGACGAATTTGCCCTGGCTTGCCACTAGCTATGAGAATGTTGCATTTGATGTTGGGATCGTTGATCAATGGTTTTGATTGGAACTTTGAAAATGATGTGAATCCAGATATCGACATGGGTCAACCCTTGCGAGCTATTCCCTTTAGAATAAACAAATCTAGTTGA 1464 0.4037 MSMDYSIIISLLLLFSCTTIHVLSNTIRRKRNHNLPPGPSPLTLVRNLVELGKKPQQTLAKLANLHGPIMRLKLGQLTTIVISSPNISKEVFQTHDLLFSNRTIPHATTVHNHSHNSVAFLPISPLWRDLRKICNNQLFSNKSLDASQNLRRKKLHELLNHVHACSLRGEAVDVGTVAFRTSINFLSNIFFSMDFVNNEDESEEYKGIVENLARVISTPNLEDFLALLKMVDPQGIRRRATTYVSKLFAIFDRLIDKRLELGVSNDDMLDTLLNISQENGQKMDTKKIKHLFLDLIVAGTDTTSYTTEWAMAELINNPNAMSKAKRELEQTIGIGNPIEESDITRLPYLHAIIKETLRLHPGAPLLLPRQANIDVEINGYTIPQGAQIVINEWAIGRDPSIWDNPTSFSPERFLGSEIDVKGRHFQLTPFGGGRRICPGLPLAMRMLHLMLGSLINGFDWNFENDVNPDIDMGQPLRAIPFRINKSS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01219 487 Gene3D Cytochrome P450 26 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 SUPERFAMILY Cytochrome P450 36 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Cca10g01219 487 Pfam Cytochrome P450 36 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 484 - -
Cca10g01219 487 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01219 487 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01219 Cca-Chr10 15988291 15991843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01219 10 474 Cytochrome P450 AT2G45550 42.827 3.03e-141 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01219 - - gmx:100792017 835.484