Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01218 ATGGATTCCGAAATTTGTACACTTCTTTTATTAACATGCACAATTATACACGTTATCTCAAATAAAGTAAGAAGAAAACTAAACTACAAACTTCCACCAGGACCTTCTCCTCTTGCCCTTGTGGCAAACCTGGTTGAACTTAGCAAAAGGCCACAACAAACACTGGCCAAGCTAGCCAAGCTCCATGGCCCCATAATGTGTTTGAAGCTTGGTCAACTAACCACCATAGTTATCTCTTCACCAGACATAGCCAAAGAGGTACTCCAAACCCATGATTTGTTATTCTCAAACCGAACAATTCCACAAGCCACAACGGTTCACAACCACAACCATTATAGCTTACCCTTCCTCCCCGTTTCACCTCTTTGGAGAGACCTTAGGAAAATATGCAACAACCAATTGTTCAACAACAAGTCCCTTGATGCAAGCCAAAACCTTAGACGCAAGAAACTGCATGAACTTCTAAATCATGTGCATGCATGCAGCCTCAAGGGTGAAGCGGTGGATATTGGAAATGTGGCGTTTAGGACCGCAATTAATTTTTTGGCAAACACTTTTTTCTCTTTGGATTTTGTTAACTCTGTAGGTGAAGGTGAAGAGTACAAGGGCATAGTGGAGAATCTTGTGAGAGCAATTGGAACGCCAAACTTGGTGGATTTTTTGCCTTTGTTGAAGATGGTTGATCCACAAGGCATTAGAAGACGCTCGTCTACTTATATTTCCATGTTGTTCGTTATTTTTGATCGGTTGATTTACAAAAGATTGGAGTTCGGAGATGCCACAATTGATGATGACATGTTAGATAAGTTGCTCAACATTTCTCAAGAGGATGGCCAGAAGATGGATCACAAAAAGATTAAGCATTTATTCCTTGATCTAATTGTTGCTGGAACTGATACAACTTCTTATACAATAAAATGTGCAATGGCTGAGCTAATCAATAACCCTAATGCAATGTCAAAAGCCAAAAGGGAGCTTGAGCAAAGCATTGGAATAGGCAATCCAATCGAAGAATCAGACGTTACAAGACTCCCATATTTGTGTGCAATAATAAAAGAGACATTACGCTTGCACCCTGCGGCCCCACTTTTGCTACCACGAAAAGGCAACATAGATGTGGAGATCAATGGCTACACTATTCCACAAGGTGCACAAATTTTCATTAATGTATGGGCTATTGGAAGGGACCCTAGCATATGGGATAACCCTAATTCATTTTCACCTGAGAGATTTTTGGGTTCAGAAATTGATGTCAAAGGTCGACATTCTCAATTAACACCGTTTGGTGGTGGGCGACGAATTTGCCCCGGGTTGCCACTTGCTATGAGGATGTTGCATTTGATGTTGGGATCGTTGATCAATGGTTTTGATTGGAAATTTGAGAATGATGTGAATCCAGATATCGACATGGGTCAACCCTTAAGAGCTATTCCATTTAGAATAAACAAATAA 1452 0.4056 MDSEICTLLLLTCTIIHVISNKVRRKLNYKLPPGPSPLALVANLVELSKRPQQTLAKLAKLHGPIMCLKLGQLTTIVISSPDIAKEVLQTHDLLFSNRTIPQATTVHNHNHYSLPFLPVSPLWRDLRKICNNQLFNNKSLDASQNLRRKKLHELLNHVHACSLKGEAVDIGNVAFRTAINFLANTFFSLDFVNSVGEGEEYKGIVENLVRAIGTPNLVDFLPLLKMVDPQGIRRRSSTYISMLFVIFDRLIYKRLEFGDATIDDDMLDKLLNISQEDGQKMDHKKIKHLFLDLIVAGTDTTSYTIKCAMAELINNPNAMSKAKRELEQSIGIGNPIEESDVTRLPYLCAIIKETLRLHPAAPLLLPRKGNIDVEINGYTIPQGAQIFINVWAIGRDPSIWDNPNSFSPERFLGSEIDVKGRHSQLTPFGGGRRICPGLPLAMRMLHLMLGSLINGFDWKFENDVNPDIDMGQPLRAIPFRINK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01218 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Cca10g01218 483 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 481 - -
Cca10g01218 483 Gene3D Cytochrome P450 17 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 Pfam Cytochrome P450 32 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01218 483 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 481 - -
Cca10g01218 483 SUPERFAMILY Cytochrome P450 32 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01218 Cca-Chr10 15953577 15956225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01218 7 482 Cytochrome P450 AT2G45550 41.752 3.52e-136 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01218 - - gmx:100792017 785.023