Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01208 ATGAAGAAGAAGAAGAACACCCAATTTCTCTTCCTTTCACTTCTTCTCTTATGTTTCACATCGCTTTCTTTTGGAGCCAACACCAACACAACTCAGCCAGAGGAAGTGGAAGCTCTGAAAGATATAGGCAACACCCTTGGTAAGAAGGATTGGAACACAGATATAGATCCATGCAGTGGAAAATCTCCATGGACTGTTGCTAATACAACGAAAGGCGTAGGAGACAATGTCACTGTAACCTGCAATTGCACTATTCCCGGTGACAACTTCTGCCATGTTGTTTCCATATTGCTGAAGTCACAAAATCTTCCAGGCATGCTCCCACCCGAACTGATAAGGTTGCCATACCTCGAAGAAATTGACCTCACTCGCAACTACCTTAATGGGACAATACCTAGTGAATGGGGCTCCTCCAAACTACGCATTATTTCTCTTCTTGGAAATCGTCTCACTGGTCAAATCCCAAAAGAGATAGGAAACATCACAACCCTTGAAAGTTTCGTCCTGGAATTCAATCAATTCTATGGAAATCTCCCAGAAGAGCTTGGGAACCTTTCTCGCATTCAAAGACTGCATCTTAGCTCTAACAACTTTACCGGAGAGTTGCCTGAAACTTTGGCGAAACTTACAACATTGAAAGAACTCCGGCTTAATGACAATAATTTCTCTGGAAAGATACCCGATTTTATTCAAGAATTCACAAATCTTGAAAAACTTTCAATTCAAGGGAGTGGTTTAAGTGGGCCAATTCCTTCTGGAATTTCATTTCTGAAAAACTTAGATGATTTGAGAATTAGTGACTTGCTTGGACCTGATTCTACTTTTCCACCAGTTAATAGTATGACAAAATTGACAGTATTGATACTAAGAAGTTGCAATATTAATGGCACATTACCTCAATATCTTGGCAACAAAACAAACTTTAACGAGATGAGCACCTTAGACCTGAGCTTTAACAAATTAAGCGGAAACATTACAGAAAGCTTTAAAGATCTGATGGCAGGATTGACTTACTTATATTTAACTGGAAACTTATTCACTGGATCAGTCCCGACGTGGGCGTTAGAAGATCATAAGCACGCCATAGATCTTTCATATAACAACTTCAGCAGTGGAAACCAACAGCAGACATGCCAACAAATCAGTACAAAAACAGAGCTGAACTTGTTTGCAAGCTTTCCAATGAGCGAAAAGGGCCCTGTTTATTGTCCAGTGGGGAGCAATGAATGTTCTAATAAATTCTCTAAGTCTCTCTATATAAATTGTGGTGGTGGAAAGGTGACAACCAGTGAAGGTATAACATATGTTGGTGATTCAGATTCAGCAGGACCATCAACATTAATACCTGAAGAGGCAGAAAAATGGGCATTTAGCAACACTGGTCACTTCTTGAATAGTGGCTCACAAGAAACAACCTATATTCATGAAAATATAACAAGGCTTTATATGTCTGATTCCACCCTGTATCAGAACGCACGTGTGTCCCCCATTTCTTTGACTTATTATGGCTTTTGTCTGGAAAATGGAGACTATACAGTAAAGCTTCATTTTGCTGAGATAATGTTCACGGATAATGACACATTTAGCAGCCTAGGGAGGCGTATATTTGATATTTACATCCAGAGAAAACTGGTTTTGAAGGATTTCAATATTGCAAATGATGCAAAAGGAGTTGGAAAGGAATCTATAAAAGAATTTCATGCTCTTGTGAGTAATAACTCTTTAGAGATTCGACTTTATTGGGCTGGAAAAGGGACAACGGAAATCCCACAAAAATCCGTATATGGCCCTCTTATTTCAGCTATATCTATCACTCATGACTCTTCAAGTAGCATATCTGCAGGGGTTATAGTTGGAATAGTAGCTGCTGCAATTGTTCTTATCATCCTAATTGTACTTGGGTGGAGAGTTTATATTGGGAAAAAAAATTCATTAGCAAAAGAGTTGAAGGATTTAAATCTACAAACGGGTGTATTTACTCTACGCCAAATTAAAGTTGCAACAAATAACTTTGATATTTCTAATAAAATTGGAGAAGGAGGCTTTGGTCCAGTCTATAAGGGCATTTTATCAGACGGTACAATAATAGCTGTCAAGATGCTTTCATCTAAGTCAAAGCAAGGAAATCGCGAGTTTATAAATGAGATAGGAATGATTTCAGCTTTGCAACATCCTTGCCTTGTCAAACTTTATGGTTGTTGTGTTGATGGAGATCAGTTGTTGTTGGTATACGAATATATGGAAAACAATAGCCTTGCACGTGCTTTATTTGGTAATGAAGAATCTTGTTTAAAATTAGATTGGCTAACAAGGCATAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCTTTCCTACATGAAGAATCAAGATTAAAAATTGTTCATAGAGACATTAAAGCTACTAATGTGTTGCTAGACAAAGACTTGAACCCAAAGATATCTGATTTTGGTCTAGCTAAGCTCGACGAGGAGGACAACACTCACATAAGCACTAGAATAGCTGGAACTTATGGATATATGGCTCCAGAATATGCAATGCATGGTTATTTGACCGACAAAGCAGATGTTTATAGTTTTGGAGTTGTAGCTTTGGAAATTGTAACAGGAAAGAACAACACCATCCATCGACCCAAACAAGAAGCATTACATCTTCTAAATTGGGCACATTTATTGAAAGAGAAAGGTAACATAATGGAGCTAATTGATCGAAGGTTAGGTTCAGATTTCAATGAAGTTGAGGCAATGGTGATGATCAAAGTGGCTCTCCTATGCACCAATCCCACTTCAAACCTTAGGCCCACCATGTCATCAGTGCTCAGCATGCTCGAAGGAAAAATTGTAATTCCAGAATATGTTTCAGATCCAACTGAGATGATGGATGAAATGAAGTTAGAGACAATGCGACAATATTACTTTCAAGTAGAAGAAAATGAGAGAAGTAAGACACAAACACAAAGTCATAGTTCATCAAATGATGGGCCATGGACTGCTTCATCTTCATCGGCTGTAGACCTATATCCTGTCCATATTGATTCTTCCTATTGGGAGAAAAGAAATTAG 3060 0.383 MKKKKNTQFLFLSLLLLCFTSLSFGANTNTTQPEEVEALKDIGNTLGKKDWNTDIDPCSGKSPWTVANTTKGVGDNVTVTCNCTIPGDNFCHVVSILLKSQNLPGMLPPELIRLPYLEEIDLTRNYLNGTIPSEWGSSKLRIISLLGNRLTGQIPKEIGNITTLESFVLEFNQFYGNLPEELGNLSRIQRLHLSSNNFTGELPETLAKLTTLKELRLNDNNFSGKIPDFIQEFTNLEKLSIQGSGLSGPIPSGISFLKNLDDLRISDLLGPDSTFPPVNSMTKLTVLILRSCNINGTLPQYLGNKTNFNEMSTLDLSFNKLSGNITESFKDLMAGLTYLYLTGNLFTGSVPTWALEDHKHAIDLSYNNFSSGNQQQTCQQISTKTELNLFASFPMSEKGPVYCPVGSNECSNKFSKSLYINCGGGKVTTSEGITYVGDSDSAGPSTLIPEEAEKWAFSNTGHFLNSGSQETTYIHENITRLYMSDSTLYQNARVSPISLTYYGFCLENGDYTVKLHFAEIMFTDNDTFSSLGRRIFDIYIQRKLVLKDFNIANDAKGVGKESIKEFHALVSNNSLEIRLYWAGKGTTEIPQKSVYGPLISAISITHDSSSSISAGVIVGIVAAAIVLIILIVLGWRVYIGKKNSLAKELKDLNLQTGVFTLRQIKVATNNFDISNKIGEGGFGPVYKGILSDGTIIAVKMLSSKSKQGNREFINEIGMISALQHPCLVKLYGCCVDGDQLLLVYEYMENNSLARALFGNEESCLKLDWLTRHKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEIVTGKNNTIHRPKQEALHLLNWAHLLKEKGNIMELIDRRLGSDFNEVEAMVMIKVALLCTNPTSNLRPTMSSVLSMLEGKIVIPEYVSDPTEMMDEMKLETMRQYYFQVEENERSKTQTQSHSSSNDGPWTASSSSAVDLYPVHIDSSYWEKRN 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01208 1019 SUPERFAMILY Protein kinase-like (PK-like) 654 964 IPR011009 -
Cca10g01208 1019 SUPERFAMILY L domain-like 42 379 - -
Cca10g01208 1019 Gene3D Ribonuclease Inhibitor 270 395 IPR032675 -
Cca10g01208 1019 ProSiteProfiles Protein kinase domain profile. 671 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g01208 1019 SMART serkin_6 671 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g01208 1019 Gene3D Ribonuclease Inhibitor 204 269 IPR032675 -
Cca10g01208 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Cca10g01208 1019 CDD STKc_IRAK 677 944 - -
Cca10g01208 1019 Gene3D Phosphorylase Kinase; domain 1 637 746 - -
Cca10g01208 1019 Gene3D - 417 609 - -
Cca10g01208 1019 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 81 985 - -
Cca10g01208 1019 MobiDBLite consensus disorder prediction 976 999 - -
Cca10g01208 1019 Pfam Malectin domain 418 602 IPR021720 -
Cca10g01208 1019 Pfam Protein tyrosine and serine/threonine kinase 673 939 IPR001245 GO:0004672|GO:0006468
Cca10g01208 1019 Gene3D Ribonuclease Inhibitor 35 203 IPR032675 -
Cca10g01208 1019 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 81 985 - -
Cca10g01208 1019 Gene3D Transferase(Phosphotransferase) domain 1 747 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01208 Cca-Chr10 15682624 15696793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01208 26 971 Receptor kinase-like Gene Family AT1G53420 54.071 0.0 959
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca10g01208 PK_Tyr_Ser-Thr 3.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01208 - - gmx:100785451 1441.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01208 10 15682624 15696793 Cca10g01208 10 15682624 15696793 ECH