Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01203 ATGAGAAACAAAAGTATTATTAAAAGAGTTTCCAACGGCAGCAATATAGTAAGGCGGTTTAAGGAAGCATTATATATCATTTCACTCTCTTCGTCTCTCTCCTCTGCCTCTTTGACCCTTTGGCAAAGAAGAGAGAAGATGGCACCTCAATTGGCAGCAACCAACTCTTCTCTTCTCCGTCTTCCCCCCTCTTCTCCTTCTCTCCCTTTCCCAAGGAATAAATATTTGATTTCTGAAAGATGCACTATAATCAACAGGAAAAAGAATCATGCCATCACAGCTTTTGCAGACAATTCTATCGGAAAATCAGCTATCCAACTCACTGCTGTTTCATCTCCACTATTTGCTGATAAAGAAGATCGCCTCTCACTCAAACTTCCCATGTCTCGGAGATTCAATTCTATGATCCGTGGACAAGCATTTATATATCATTCATCTGGTTTTCGAATCCCAGCAAATGCTGAGAAGCCAGAATGGTGGTGGAGAACTTTATCCTGTGTTCCCTATCTAATAGCATTGCAGATATCCGCCACCGGGTTTTATCTAGAGCCTTTACTTGAAAAATTTCCATTCTTTCATAATTTGATCTTTTATATCCCAGGAGCTGCCAACCGATTACCAAACTGGTTCCCCATGTTATATTGCTATGTGGCTATTGTGTGGGTGGTTAAAAACAGAGACCTTCCCCTTATCTTCAGATTCCATGTAATGATGGGAATGTTACTGGAACTCACTCTGCAGATAGTGTGGGTTGCAAGCAATTTCATGCCACTTATACACTTCAAGGGAACATTGGGGATGTATTACTGGGCTGGTGTGGCGTTGGCATATATTTATGTAATGATGAGGTGCATAAGGAGTGCGCTTCTGGGCACATTTGTGAGCATCCCTGTACTTAGTGAATCAGCTTTCCTTCATTCTCTATTCGGTTTAGGAGGATTTCAACCTCCATTTTAG 957 0.4138 MRNKSIIKRVSNGSNIVRRFKEALYIISLSSSLSSASLTLWQRREKMAPQLAATNSSLLRLPPSSPSLPFPRNKYLISERCTIINRKKNHAITAFADNSIGKSAIQLTAVSSPLFADKEDRLSLKLPMSRRFNSMIRGQAFIYHSSGFRIPANAEKPEWWWRTLSCVPYLIALQISATGFYLEPLLEKFPFFHNLIFYIPGAANRLPNWFPMLYCYVAIVWVVKNRDLPLIFRFHVMMGMLLELTLQIVWVASNFMPLIHFKGTLGMYYWAGVALAYIYVMMRCIRSALLGTFVSIPVLSESAFLHSLFGLGGFQPPF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01203 318 Pfam Chloroplast import apparatus Tic20-like 130 303 IPR005691 -
Cca10g01203 318 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 53 318 IPR005691 -
Cca10g01203 318 PANTHER PROTEIN TIC 20-IV, CHLOROPLASTIC 53 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01203 Cca-Chr10 15509319 15514459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01203 149 317 Chloroplast and Mitochondria Gene Families AT4G03320 57.396 8.60e-75 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01203 - - aprc:113869676 444.506