Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01202 ATGACTTCGGGGACGAGGCTACCCACGTGgaaggagagagagaacaacaagaggagagagaggagaagaagagCCATAGCTGCCAAGATCTTCGCAGGTCTTAGGATGTATGGAAACTTCAAACTCCCCAAACACTGCGACAACAATGAAGTCCTCAAAGCTCTCTGCAACGAAGCTGGTTGGACCGTTGAACCCGATGGAACCACTTACCGAAAGGGATGCAAGCCTTTAGAGCGCATGGACATAGTTGGTGGATCATCAGCAGCAAGCCCTTGTTCATCTTACCATCCAAGTCCATGTGCTTCCTACAATCCAAGCCCTGGCTCATCCTCATTTCCAAGCCCATCCTCATCTCCTTACACCACAATTCCTAATGCTGATGGCAATTCCCTCATTCCATGGCTCAAAAACCTCTCTACTGCCTCATCCTCAGCCTCATCTCCTAAGCTCCCCCACCTCTACCTCCACAGCGGCTCCATCAGCGCGCCGGTCACGCCTCCTCTGAGCTCTCCAACAGCCAGAACGCCACGAACCAACGTGGAGTGGGACGACCAGTCTGCCAGGCAGGGTTGGACCAGGCAGCAGCACTACTCATTCCTGCCATCTTCTAGTCCTCCAAGCCCCGGACGCCAGGTTGTTGACCATGAGTGGTTTGCAGGGATCAAGCTTCCTCATGTGAGTCCAACTTCACCAACATTCAGCTTGGTATCCTCAAATCCTTTCGCCTTCAAGGAAGACGGCTTGGCCGGCAGCGGCTCGCGAATGTGGACTCCGGCTCAGAGTGGAACATGCTCCCCTGCTGTTCCACCAGGCTCTGATCACACTGCTGACATTCCAATGTCTGAAGCTGTTTCAGATGAATTTGCATTTGGAAGCAACATGTTGGGGCTTGTCAAGCCATGGGAAGGAGAAAGGATCCATGAGGAGTTTGGATCAGATGATCTTGAACTCACACTTGGTAACTCCAAGACCAGATGA 978 0.5031 MTSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIVGGSSAASPCSSYHPSPCASYNPSPGSSSFPSPSSSPYTTIPNADGNSLIPWLKNLSTASSSASSPKLPHLYLHSGSISAPVTPPLSSPTARTPRTNVEWDDQSARQGWTRQQHYSFLPSSSPPSPGRQVVDHEWFAGIKLPHVSPTSPTFSLVSSNPFAFKEDGLAGSGSRMWTPAQSGTCSPAVPPGSDHTADIPMSEAVSDEFAFGSNMLGLVKPWEGERIHEEFGSDDLELTLGNSKTR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01202 325 MobiDBLite consensus disorder prediction 252 272 - -
Cca10g01202 325 MobiDBLite consensus disorder prediction 1 20 - -
Cca10g01202 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Cca10g01202 325 MobiDBLite consensus disorder prediction 164 190 - -
Cca10g01202 325 MobiDBLite consensus disorder prediction 254 268 - -
Cca10g01202 325 MobiDBLite consensus disorder prediction 99 121 - -
Cca10g01202 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 325 - -
Cca10g01202 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01202 Cca-Chr10 15502127 15508400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01202 1 325 BZR Transcription Factor Family AT1G78700 71.045 3.94e-142 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Cca10g01202 BES1_N 2.2e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01202 - - gmx:100795369 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01202 10 15502127 15508400 Cca10g01202 10 15502127 15508400 ECH