Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01177 ATGAACCcttcttcttcttcttcttcttcttcttcttcttcttGTGTGGGGTTCGCTGAGTTCTACGAGACATGGTTCTCGGAGCTGCAGAGGGTGGTGCAGGAGCTGAGGGGTTCGCGGAGGGTGGAGGCCATGGAGAAGGTGATGCGCCACCACCACAAGTACTACGCAGAGAAGTCCCTGGCGGCGGAGAAGGACCCTCTGGCCGTCTTCCTCTCGCCCTGGGCCACCGCCCTGGAACGGTCCCTCCACTGGATCTCCGGCTGGCGCCCCACCACCGCCTTCCACCTCGTCTACACCGAGTCCTCCCTCCTCTTCGAGTCCCACATCATCGACATCCTCCAAGGCCACCGCACCGGCGACCTCGGCGACCTCTCTCCCGCCCAGCTCCGGCGCTTCAGCGACCTCCAATGCCTCACCGTGAAGGAAGAGAATGCATTAACGGAGGAGCTATCGGAGTGGCAGGACAGTGTGAGCGAGATCATGGGCCCAGGCGCCGCCTTCAGCGAGAAGATCGGACGCCTCGTACGCATTATAAAGAGGGCGGACAATCTACGGCTTAGAACGTTGCGGAGCGTGGTGGGGCTGCTGTCGCCGCAGCAGGCTATCGAGTTCTTGATCGCTTCGGCTGAGTTGCTTCTTGGGATACGCGGTTGGGGATTGAATCACGACCGTCCCTACCGCAAATGA 690 0.587 MNPSSSSSSSSSSSCVGFAEFYETWFSELQRVVQELRGSRRVEAMEKVMRHHHKYYAEKSLAAEKDPLAVFLSPWATALERSLHWISGWRPTTAFHLVYTESSLLFESHIIDILQGHRTGDLGDLSPAQLRRFSDLQCLTVKEENALTEELSEWQDSVSEIMGPGAAFSEKIGRLVRIIKRADNLRLRTLRSVVGLLSPQQAIEFLIASAELLLGIRGWGLNHDRPYRK 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01177 229 ProSiteProfiles DOG1 domain profile. 15 226 IPR025422 GO:0006351|GO:0043565
Cca10g01177 229 Pfam Seed dormancy control 42 100 IPR025422 GO:0006351|GO:0043565
Cca10g01177 229 PANTHER DNA-BINDING PROTEIN-LIKE PROTEIN 12 226 - -
Cca10g01177 229 PANTHER - 12 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01177 Cca-Chr10 15106646 15107793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01177 9 208 bZIP Transcription Factor Family AT5G06950 23.556 1.55e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01177 - - gmx:778192 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01177 10 15106646 15107793 Cca10g01177 10 15106646 15107793 ECH