Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01165 ATGGCTACCTTCTCTAAGGAACGCGAGAGCCTTGTCTATGTTGCCAAGTTGGCTGAACAAGCTGAACGCTATGATGAAATGGTGGATGCCATGAAGAAGGTGGCGAAGCTGGACGTTGAGTTGAGTGTGGAAGAGAGGAACTTGTTCTCTGTTGGATACAAGAATGTGGTGGGGTCACGGAGAGCTTCATGGAGGATCTTGTCATCCATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGTTGAATGTCAAGCGTATCAAGGATTACATGCACAAGGTGGAATTGGAGCTGTCCAACATTTGCAGTGACATTATGATAGTTTTGGATGAGCATCTTATTCCCTCCACTAATATTGCGGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGACTATCACCGCTACTTGGCAGAATTCAAAAATGGTAATGAAAAGAAAGAGGTAGCAGATCAGTCACTTAAAGCATATCAGGTATTTGCTGGAGGTAACAAGGATTACCTCTGTAAAATGAGTTTGATTATATTACAGTGGTATTGA 537 0.4227 MATFSKERESLVYVAKLAEQAERYDEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVKRIKDYMHKVELELSNICSDIMIVLDEHLIPSTNIAESTVFYYKMKGDYHRYLAEFKNGNEKKEVADQSLKAYQVFAGGNKDYLCKMSLIILQWY 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01165 178 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Cca10g01165 178 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Cca10g01165 178 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Cca10g01165 178 SMART 1433_4 8 177 IPR023410 -
Cca10g01165 178 PANTHER GENERAL REGULATORY FACTOR 2 3 161 - -
Cca10g01165 178 Gene3D - 1 177 IPR036815 -
Cca10g01165 178 SUPERFAMILY 14-3-3 protein 7 175 IPR036815 -
Cca10g01165 178 PANTHER 14-3-3 PROTEIN 3 161 IPR000308 -
Cca10g01165 178 Coils Coil 14 34 - -
Cca10g01165 178 Pfam 14-3-3 protein 15 158 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01165 Cca-Chr10 14951326 14956464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01165 5 158 14-3-3 family AT2G42590 76.623 4.25e-84 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01165 K06630 - gmx:547574 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01165 10 14951326 14956464 Cca10g01165 10 14951326 14956464 ECH