Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01151 ATGGGTCCAAAGAAATGGTTCAAGATAATAGTTAAACTGAAGAAATCGAAGAACAAAAAAGAAAAGAATTCAAATGAATACACCAACGGGAAGCAGAGTACTCGTGAAGAGTCAAGTAGCATTCCGAATGAAGGTTTGATGATGGACCGGACTGTTCCCGCCAGGTTGATGGACGATATCGCAGCAACTCGGATTCAAAATGCATTTCGATCATTTATGGCAAGAAGAACATTACACCATCTAAGGGGAGCAGTGAAATTCGAAACTTTAATTCAAGATCACCTAGCCAAAGAGCAAACAGCAACTGCACTAAGCTATATACATTCATGGAGCAGAATTCAAGAACAAATTAGAGCTCGAAGAATCTGTATGATAACAGAAGCGAGGATTAAACAAAAGAAATTGGAAAGCCAGTTAAAACTTGAGGCTAAGATTCATGAGCTGGAGGTGGAATGGTGCAGTGGTTCTGAAACCATGGAAGAGATACTTTCCAGGTTGCAACAGCGAGAGGAAGCAGCAATTAAACGAGAGAGAGCCATGGCATATGCCTTCTCTCATCAGTGGAGGCCAAACTGTAGCCAGTATTTTGGTCAGGCTTCGTATAGCCTTGGTAAAGAAAGTTGGGGTTGGAGCTGGACAGAGCGTTGGGTTGCAGCACGTCCTTGGGAAGTCCGGGTTAGGGTTCAATCCACCAAAACAAAGAAACTCAATGGGCAGCAGCAAAAAACAAAATTGGATAAGATGAATCACAGTGAAAGCAAAGTGGCCTTGGCTAAACACGCCCTGTCAAACGGCAAGGAGAATGGGAAAGGAAAAGAAAACGGTACTTCAGGGATGTCAAAGAACAATGATTCGAAATAG 861 0.4274 MGPKKWFKIIVKLKKSKNKKEKNSNEYTNGKQSTREESSSIPNEGLMMDRTVPARLMDDIAATRIQNAFRSFMARRTLHHLRGAVKFETLIQDHLAKEQTATALSYIHSWSRIQEQIRARRICMITEARIKQKKLESQLKLEAKIHELEVEWCSGSETMEEILSRLQQREEAAIKRERAMAYAFSHQWRPNCSQYFGQASYSLGKESWGWSWTERWVAARPWEVRVRVQSTKTKKLNGQQQKTKLDKMNHSESKVALAKHALSNGKENGKGKENGTSGMSKNNDSK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01151 286 MobiDBLite consensus disorder prediction 27 45 - -
Cca10g01151 286 MobiDBLite consensus disorder prediction 239 254 - -
Cca10g01151 286 MobiDBLite consensus disorder prediction 269 286 - -
Cca10g01151 286 PANTHER IQ-DOMAIN 5-RELATED 10 277 - -
Cca10g01151 286 MobiDBLite consensus disorder prediction 16 45 - -
Cca10g01151 286 PANTHER IQ-DOMAIN 10 10 277 - -
Cca10g01151 286 ProSiteProfiles IQ motif profile. 61 86 IPR000048 GO:0005515
Cca10g01151 286 MobiDBLite consensus disorder prediction 232 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01151 Cca-Chr10 14757552 14761567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01151 55 271 IQD Protein Family AT3G15050 55.300 2.39e-84 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01151 - - gmx:100809360 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01151 10 14757552 14761567 Cca04g01481 04 20702532 20709625 ECH
Cca10g01151 10 14757552 14761567 Cca10g01151 10 14757552 14761567 ECH