Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01119 ATGGCCACTAGAGAAATCCTTCAAAAGATGAAGGTAAAAGTTGGTTTGGGTTCATCAGACCCTGGTTCAGGGAAAGGAAAGAGCAAGATGTCAAAGAACATAACTCATGGCTTTCATTTGGTAAAAGGAAAATCATATCATGACATGGAGGATTATGTTGTTGCTGAATTTAAGCAAGTAGATAACAATGAATTGGGTTTGTTTGCAATATTTGACGGCCACGCGGGTCACAATGTACCTAATTACTTGCGGTCTCATTTGTTTGAAAATATCTTAAAAGAGCCTGACTTCTGGAAAGAACCTGCAAATGCTGTGAAGAGAGCATACAGTGTAACTGATTCTAATATTTTAGAGATGTCTGGTGAATTGGGTAGAGGGGGTTCAACTGCAGTTACAGCAATACTAATCAATTGTCAGAAGTTAGTAGTAGCCAACATTGGGGACTCTAGGGCTGTCTTATGCAAGAAAGGTGTGGCCAAACAACTATCAGTGGATCATGAGCCAATCACAGAACACGAGGACATAAAAAATAGAGGTGGTTTTGTATCAAACTTTCCAGGGGATGTTCCACGGGTTGATGGACGGCTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCTTGAAGAAACACTTGAGTTCAGAGCCGTATGTGACACTGGAGGGGATAGATGATGATGCAGAATTAGTTATATTAGCCAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGTTAATTGTATCAGAAATATAAAGGATGCTCGGTCTTCAGCAAAACGCCTTACTGAAGAAGCAGTTAACAGGAAAAGCAAGGATGATATCTCGTGCATTGTTGTGAAATTTCAGTGA 852 0.4038 MATREILQKMKVKVGLGSSDPGSGKGKSKMSKNITHGFHLVKGKSYHDMEDYVVAEFKQVDNNELGLFAIFDGHAGHNVPNYLRSHLFENILKEPDFWKEPANAVKRAYSVTDSNILEMSGELGRGGSTAVTAILINCQKLVVANIGDSRAVLCKKGVAKQLSVDHEPITEHEDIKNRGGFVSNFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPYVTLEGIDDDAELVILASDGLWKVMSNQEAVNCIRNIKDARSSAKRLTEEAVNRKSKDDISCIVVKFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01119 283 CDD PP2Cc 36 282 IPR001932 -
Cca10g01119 283 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Cca10g01119 283 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Cca10g01119 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Cca10g01119 283 SMART PP2C_4 25 280 IPR001932 -
Cca10g01119 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Cca10g01119 283 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 283 - -
Cca10g01119 283 Gene3D - 30 283 IPR036457 -
Cca10g01119 283 PANTHER PROTEIN PHOSPHATASE 2C 1 283 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01119 Cca-Chr10 14196116 14199883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01119 1 283 PP2C-type Phosphatase Gene Family AT3G15260 74.048 1.36e-158 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01119 K17506 - gmx:100500617 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01119 10 14196116 14199883 Cca10g01119 10 14196116 14199883 ECH