Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01097 ATGCTGAACCGGTTTTGGCTAATGCCAAAGGGGCTTGAGAGGGTCCTAAGAGACCAAGGCCTTCAAGGAAACCCCTACAAGCTTTTGGTTGGGGATTTAAAGGACATTCTGAAGATGCAAAATGAGGCCAAATCCAAACCCATGAGTCTCTCACATGATATAGTGCCACGTGTGCTTTCCCATGTCCATCAGAGTGTCAAAAAACATGGCAAGAATACTTTTATTTGGTTTGGACCAAAACCAAGGGTGACCCTCACAGATCCTGAGCTAATCAAAGAAGTACTTAACAAGATGTATGATTTCCAAAAGCCTAAAACGACTCCGCTTGCCAAGTTACTTGCTACTGGTCTTGTAAACTATGAAGGAGAAAAGTGGAACAAGCACAGAAGAATAATTAACCCTGCATTCAATTTGGAAAAATTGAAGAATATGTTACCAATATTCTTCAAAAGTTGCAATGATCTAATTATCAAGTGGGAGGAAATGTTGTCTTCTGAGGGATCATGTGAAATGGATGTTTGGCCTTTCCTTCAAAATTTGGCTAGTGATGTTATTGCTCGAGCAGCATTTGGAAGTAGTTATGAAGAAGGGAGAAGAATATTTCAACTTCAGAAAGAGCTAGCAGAACTTACAGTTAAAGTTATAATGAATGTTTACATCCCTGGATGGAGATTTCTACCTACTCCTACCAATAGAAGAATGAAGGAAATTAATAGAGAAATAAAAGCTTCTCTTACAGATATGATTAAGAAGAGAGAGAAAGCTCTAAAGATAGGTGCAGCTACTAAGGATGATTTGTTAGGTATACTCTTGGAGTCAAATCACAAGGAAATCCAAGAAAAAGGAAACAACAAGAATGTTGGAATGAATCTTGATGATGTAATCGAGGAATGCAAGTTATTCTACTTTGCAGGGCAGGAGACCACTTCAACTTTACTTGTTTGGACAATGGTGTTGTTAAGTAAGTACCCTGATTGGCAAGCCCGTGCAAGGGAGGAAGTTTTACAAGTCTTTGGCAAAGAATCACCAAATTTTGATGGGCTAAGTCACCTCAAGATTGTCACCATGATTTTGTATGAGGTTCTTAGATTATACCCGCCAGCAGTTAGCCTTACTAGAAGTGTTAACAAAGATTTGAAACTTGGAATTCTATCATTACCAGCTGGAGTGCAAGTTTCGTTGCCAACACTTATGATTCATCATGACAATGAACTTTGGGGTGATGATGCCAAAGAGTTCAAACCTGAGAGATTTTCTGAAGGAGTTTCAAAAGCAACAAATGGCAGAGTTTCATTTTTTCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTCTCTTTGTTGGAGGCAAAGATGGCTATGTCAATGATTTTACAACATTTCTCATTTGAACTTTCTCCAGCTTATGCTCATGCTCCGGTTACAATATTTACTCTTCAGCCCCAATATGGTGCTCACATCATTTTACATAAAGTTCAAATCTAA 1491 0.3856 MLNRFWLMPKGLERVLRDQGLQGNPYKLLVGDLKDILKMQNEAKSKPMSLSHDIVPRVLSHVHQSVKKHGKNTFIWFGPKPRVTLTDPELIKEVLNKMYDFQKPKTTPLAKLLATGLVNYEGEKWNKHRRIINPAFNLEKLKNMLPIFFKSCNDLIIKWEEMLSSEGSCEMDVWPFLQNLASDVIARAAFGSSYEEGRRIFQLQKELAELTVKVIMNVYIPGWRFLPTPTNRRMKEINREIKASLTDMIKKREKALKIGAATKDDLLGILLESNHKEIQEKGNNKNVGMNLDDVIEECKLFYFAGQETTSTLLVWTMVLLSKYPDWQARAREEVLQVFGKESPNFDGLSHLKIVTMILYEVLRLYPPAVSLTRSVNKDLKLGILSLPAGVQVSLPTLMIHHDNELWGDDAKEFKPERFSEGVSKATNGRVSFFPFGWGPRICIGQNFSLLEAKMAMSMILQHFSFELSPAYAHAPVTIFTLQPQYGAHIILHKVQI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01097 496 Gene3D Cytochrome P450 8 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01097 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Cca10g01097 496 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 485 - -
Cca10g01097 496 PANTHER CYTOCHROME P450 72A11-RELATED 9 485 - -
Cca10g01097 496 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01097 496 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01097 496 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01097 496 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01097 496 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01097 496 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01097 496 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01097 496 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01097 496 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01097 496 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01097 496 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01097 496 Pfam Cytochrome P450 60 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01097 496 SUPERFAMILY Cytochrome P450 55 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01097 Cca-Chr10 13889559 13892775 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01097 6 494 Cytochrome P450 AT3G14680 61.020 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01097 - - gmx:100777623 870.922