Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01089 ATGGAGAAGAAATCAATGGCTGGATTGTGCTTCCTCTTCCTCGTTCTCTTTGTTGCTCAAGAAGTGGTGCAAACTGAGGCAAAGACGTGCGAGAATCTGGCTGATACATACAGGGGTCCATGCTTCACCACTGGCAGCTGCGATGATCACTGCAAGAATAAAGAACACCTGATCAGTGGCAGGTGCAGGGACGATTTTCGTTGCTGGTGCACCAGAAACTGTTAA 225 0.4844 MEKKSMAGLCFLFLVLFVAQEVVQTEAKTCENLADTYRGPCFTTGSCDDHCKNKEHLISGRCRDDFRCWCTRNC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01089 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Cca10g01089 74 SUPERFAMILY Scorpion toxin-like 28 74 IPR036574 -
Cca10g01089 74 PANTHER DEFENSIN 1 74 - -
Cca10g01089 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
Cca10g01089 74 SMART gth_4 29 74 IPR003614 GO:0006952
Cca10g01089 74 Pfam Gamma-thionin family 28 74 - -
Cca10g01089 74 Gene3D - 28 74 IPR036574 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01089 7 74 Plant Defensins Gene Families AT1G61070 37.681 1.56e-10 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01089 - - gmx:100779239 156.762