LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca10g01037	ATGTCCAGTGAGCACACAATGTTCCATGATGAAGAGGGCAAGGATGAAGGTGGAAGAAGCAGAAGCAGAAGCAGGAGAACCAATGGGAAGGGTCCAAAGAAGCCACCCCAGAGAGGTTTGGGAGTGGCTCAGTTGGAAAGGTTGAGAATTCAAGAGACTTGGAAGAAGATGAGTGAAGGTTCTGAACCAACTTTCcatgatcatcaccatcatcatcaCTTTCTTCAGTGCCACCCTCAAGTGTTTGCAAGTGGCAGTGTTCCTGTGAGGTATGGTGCACCTGCACCCTCGTCAAACCATGCCTTTCAGTGTCCTCAACAACATGTGATCAATGGGAGCAACACTATTGGTGTGTCGAGTCAGTGTCCTTTTGTTGGGAATAAGAGTGGTGGGGGTTGGATACTTCCAAACATGATGGGCTCCTATGGATCTGGGCCCCCACTTTTGGTTGGAACCCCTCTTGAGACCTCGAAAGAGCTCTCTTCAATGCCAAATCATTATTCTGATCCTGAATGTTTTGATGTTTGCCTCAAGAAATCACGTTTGAACGAGGACAGTGGAAAGGGATCAAATGCAAGGAGGGACAGGTCTTTGGAGACATGGGCCAATGGCCATGATTTTCTAGGATTTATCCCTCAATCTGCTGCTCCAAGCTTTGTTGGGGAAACCAGTGATTTCTATAACAAACTGGCCAGGCATGATGGTGCTAGTGCATATGCTTGTGCTACTCCCAATGATGAGTGTGTGGAGGTTGTTGCGGTTCACAGGAGGGGAAACTCAGTGAGTGGCAGGGTTTTCATGGAATATGAGTTTTTCCCAGGAAAAGATGGCAGAGGCACTACTTCCAAGGAGCTGGAATTGCCCTCAATAGGTTCAGTTGCAGTAGGTGGTGAAGCTTCTTCTATCACTGTTACACCCTATGGAGATTCTGCTTCTAATTCTATTGATTTGTCTCTGAAGCTTTCACGCTAG	972	0.4609	MSSEHTMFHDEEGKDEGGRSRSRSRRTNGKGPKKPPQRGLGVAQLERLRIQETWKKMSEGSEPTFHDHHHHHHFLQCHPQVFASGSVPVRYGAPAPSSNHAFQCPQQHVINGSNTIGVSSQCPFVGNKSGGGWILPNMMGSYGSGPPLLVGTPLETSKELSSMPNHYSDPECFDVCLKKSRLNEDSGKGSNARRDRSLETWANGHDFLGFIPQSAAPSFVGETSDFYNKLARHDGASAYACATPNDECVEVVAVHRRGNSVSGRVFMEYEFFPGKDGRGTTSKELELPSIGSVAVGGEASSITVTPYGDSASNSIDLSLKLSR	323

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca10g01037	323	PANTHER	OS01G0212500 PROTEIN	16	322	IPR040356	GO:0003700
	Cca10g01037	323	PANTHER	PROTEIN SPOROCYTELESS	16	322	IPR014855	GO:0003700
	Cca10g01037	323	MobiDBLite	consensus disorder prediction	1	23	-	-
	Cca10g01037	323	MobiDBLite	consensus disorder prediction	1	45	-	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	NOZZLE	Cca10g01037		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca10g01037	-		-	lang:109348179	284.648

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca10g01037	10	12741690	12743115	Cca10g01037	10	12741690	12743115	ECH