Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01005 ATGTTGACAGGAGAGGTAGTTGCCTGTCTATTGATACGTGCAAACCAATGGAGACACCGACTGACAGAGGAAGATGCCCAACACTTTGACATGTGTGTGGACATTCTAGAAGATTCTGACGGCGGTGGGTTCAATGGTGCTTATGCGAAGGATGAGGGTACTGGGCTGTGGGAAGGCGGAGAATTACTTGACAGAATTCTAGATAGAGGTGGAAGATATCCAGAGGATGACGCGAAAGCTATTCTTGTACAAATTCTAGATGTAGTTGCATTTTGTCATCTTCAAGGAGTTGTTCATCGTGATTTAAAACCAGAGAATTTTCTTTTTGTCTCAAAAGATGAGGATTCTGTGATGAGGATCAGTTGCAGTAAAAAAATTATTAAAAAAATTATTAAAAAAAAATTAAACATATAG 414 0.3913 MLTGEVVACLLIRANQWRHRLTEEDAQHFDMCVDILEDSDGGGFNGAYAKDEGTGLWEGGELLDRILDRGGRYPEDDAKAILVQILDVVAFCHLQGVVHRDLKPENFLFVSKDEDSVMRISCSKKIIKKIIKKKLNI 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01005 137 SUPERFAMILY Protein kinase-like (PK-like) 56 120 IPR011009 -
Cca10g01005 137 PANTHER SERINE/THREONINE-PROTEIN KINASE 56 119 - -
Cca10g01005 137 PANTHER CDPK-RELATED KINASE 7 56 119 - -
Cca10g01005 137 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g01005 137 Pfam Protein kinase domain 58 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g01005 137 ProSitePatterns Serine/Threonine protein kinases active-site signature. 97 109 IPR008271 GO:0004672|GO:0006468
Cca10g01005 137 Gene3D Transferase(Phosphotransferase) domain 1 46 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01005 Cca-Chr10 11951590 11960481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01005 27 120 EF-hand Containing Proteins AT2G46700 60.638 1.16e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca10g01005 Pkinase 4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01005 - - var:108331904 127.487