Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00968 ATGGCTACCATCATTTTAAAGTCTAATGAAGTAGTCCATGCCTTGGTCTTGTTCAGTATCTTGCTGTTGTTGGTGCACAAGGGTGATGCCTATGATTTTGTTGTTGGAGGCCAAAAGGGTTGGAGTGTCCCAAGTGACCCCAATTCCAACCCTTACAATCAATGGGCACAAAAGAGCCGATTTCAAATTGGAGACTCTCTAGTGTTCAACTACCCTTCTGGCCAAGACTCAGTGATTCAAGTCAGTAGCCAAGACTATGCCAACTGCAACACTGATGCATATTCTCAAAAATTCTCTGATGGCCACACAATCATCAAGCTCAACCGATCAGGGCCTCACTTCTTCATCAGTGGAAACAAAAACAACTGTCTCAAGAATGAGAAGCTGGTGGTAATTGTACTGGCAGACAGGAACAACAGAAACACAAACActgcttctccatctccttctccttctccttcAGTTACAACAAAGTCACTGGCTCCTTCACCAGCACCTTCTCAGAAAGAGGTTCAATCTCCAGTGGCAGCACCTGCTCAGCAAGAGGCTCCTTCTCCACCATCTCCAGTCACAAACACAACTCCAGCTCCAGCACCCGCTAGTGATCAAACTCCTGCTTCTCCTCATAAATCTAATGCTGCTTCTTCAATCTTTGTCAGCTTTGCTGGCTCTGTTGGAGCATTCTTGGTCACAGTTCTGGTTGCTTCTTTCTAA 714 0.4342 MATIILKSNEVVHALVLFSILLLLVHKGDAYDFVVGGQKGWSVPSDPNSNPYNQWAQKSRFQIGDSLVFNYPSGQDSVIQVSSQDYANCNTDAYSQKFSDGHTIIKLNRSGPHFFISGNKNNCLKNEKLVVIVLADRNNRNTNTASPSPSPSPSVTTKSLAPSPAPSQKEVQSPVAAPAQQEAPSPPSPVTNTTPAPAPASDQTPASPHKSNAASSIFVSFAGSVGAFLVTVLVASF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00968 237 PANTHER BLUE COPPER PROTEIN 19 236 IPR039391 GO:0009055
Cca10g00968 237 MobiDBLite consensus disorder prediction 195 212 - -
Cca10g00968 237 Gene3D - 31 147 IPR008972 -
Cca10g00968 237 Pfam Plastocyanin-like domain 41 125 IPR003245 GO:0009055
Cca10g00968 237 MobiDBLite consensus disorder prediction 180 194 - -
Cca10g00968 237 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 19 236 - -
Cca10g00968 237 MobiDBLite consensus disorder prediction 140 212 - -
Cca10g00968 237 CDD OsENODL1_like 31 134 IPR041846 -
Cca10g00968 237 ProSiteProfiles Phytocyanin domain profile. 31 135 IPR003245 GO:0009055
Cca10g00968 237 MobiDBLite consensus disorder prediction 140 179 - -
Cca10g00968 237 SUPERFAMILY Cupredoxins 30 134 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00968 Cca-Chr10 11283508 11284998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00968 15 217 Phytocyanin Superfamily AT3G20570 47.619 1.41e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00968 - - gmx:100788637 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00968 10 11283508 11284998 Cca10g00968 10 11283508 11284998 ECH