Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00951 ATGGCCCTCTCATTACGTATCCACTTCTTTGTTGCACTTTCTCTCCTTGCTTGCTCTACCAATGCACAACTTTCTACCGACTTCTATGATAAAACTTGTCCTAACCTTCAAAGCATTGTGAGAAATGCAATGGAAAAAGCTATCAATGGAGAAGCTCGCCTTGGAGCCTCTATACTTCGATTGTTCTTCCACGATTGTTTCGTGAATGGTTGCGATGCATCAATCTTATTGGATGACACTGGCACCTTCGTCGGTGAGAAAAATGCAGTGCCTAACCAAAATTCAGCGAGGGGTTTCGAAGTGATTGATACCATTAAAACCATCGTTGAATCTGCTTGCAATGGCACTGTCTCTTGTGCAGATATTCTTGCACTTGCAGCAAGAGATGGGGTAGTTCTGCTTGGAGGGCCCTCATGGGCAGTACCTCTAGGTAGAAGAGATGCAAGAACAGCAAGCCAGAGTGCAGCCAACAACGAAATCCCTTCTCCATTCTCTGACCTTCCCACACTCACTTCCATGTTCGCCGCCAAAGGCCTAAGCGCACGTGACCTCACCGTGCTCTCCGGCGGCCACACCATAGGGCAAGCCCAATGCCAGTTCTTCAGAACTCGCATATATaacaataacaataacaacaacaacaataacaaTATTGATGCCGACTTTGCGGCATCAAGAAGGGCCATTTGCCCTCCCTTTGGTGGGGACTCCAATTTGTCCCCTATGGAATCCCTCACTCCAAATCACTTCGACAACTACTACTACTCAGAGATTGTGGCTAACCGTGGCCTTCTCGACTCGGATCAAGTGCTTCTTAGTGACCCTTTGGTCACGACTTATAGTACCAATAATGCTGCTTTTTTCACTGACTTTGCTGATGCTATGGTTAAGATGAGCAACATCAGTCCTCTCACTGGGACTAGTGGAGAAATCAGAAAAAATTGCAGGCTTGTCAATTGA 960 0.4542 MALSLRIHFFVALSLLACSTNAQLSTDFYDKTCPNLQSIVRNAMEKAINGEARLGASILRLFFHDCFVNGCDASILLDDTGTFVGEKNAVPNQNSARGFEVIDTIKTIVESACNGTVSCADILALAARDGVVLLGGPSWAVPLGRRDARTASQSAANNEIPSPFSDLPTLTSMFAAKGLSARDLTVLSGGHTIGQAQCQFFRTRIYNNNNNNNNNNNIDADFAASRRAICPPFGGDSNLSPMESLTPNHFDNYYYSEIVANRGLLDSDQVLLSDPLVTTYSTNNAAFFTDFADAMVKMSNISPLTGTSGEIRKNCRLVN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00951 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Cca10g00951 319 Gene3D Peroxidase, domain 2 161 299 - -
Cca10g00951 319 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Cca10g00951 319 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Cca10g00951 319 PANTHER PEROXIDASE 13 319 - -
Cca10g00951 319 SUPERFAMILY Heme-dependent peroxidases 23 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 CDD secretory_peroxidase 23 318 IPR033905 GO:0004601|GO:0042744
Cca10g00951 319 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 Gene3D - 28 319 - -
Cca10g00951 319 PANTHER PEROXIDASE 72-RELATED 13 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 Pfam Peroxidase 40 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g00951 319 ProSiteProfiles Plant heme peroxidase family profile. 23 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00951 Cca-Chr10 11024796 11028404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00951 22 319 Peroxidase AT5G05340 59.539 8.71e-126 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00951 K00430 - gmx:100806309 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00951 10 11024796 11028404 Cca10g00951 10 11024796 11028404 ECH