Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00871 ATGGAAATTTTTCGTTCTCAGAATCGCAGTAACTTCTTGTCCTCCTCCAACGACGCCGTTTCGGTTCCCACCATTCCCCTCTATCGCTCCGCCCCGGCGCTCGAAGTCAGGCTTGAGGATTTCGAGTCCTTCGCCATCGACCGCCTCCGAGTTCTCAAGGGGATTTCTGATGGTTTGTCACGGGGAAAGAAACCTGACGAAATGGAAAATTTGGTAAAGGATCTGTGGAAAGTGAATATGAGACACCAACACGCATCTGAGGTTCTAAACAAGGATATTATATCTCATTTTGTTCTGCGTTTGGTGTATTGCAGAACGGAGGACCTGAGGAAATGGTTTCTTTCTATGGAATCTGCACTCTTTCGATACCGTTTTCGTCTTCTGAATGCTGAAGCTCAGAGGGCAGTCATGGATGAATTTGACCTTCCTTACAGGGCTGTTAGCAATGTGGAATTTGAGAGCATAAAAGAGAAATTGGGACAAGTTGCACGTTCTATGGGTCAGCCTTCACCCACTGCTGATGCTATCTTCTACAAGAAGATACTCAAAATGTCTGAGGGAATTGAAGAGAAAGGAAAGAGAATCGCTATCATTGTTGTCTCAATCTTAATATTGGTGGCCATGATCGTGGCTATGACATTTGGTTTTAATCGCGATGAGAGTGATTCAAATAATGATATAGAAGATACCAAGAAGGACAACATTGTTTCTACTGTGAAATTCGTCCAAACCCTTTGTTACCCTACTAATTATAAGAAAGAATGTGAGAAAATAGTAAGGGTTGAAAACACCAAGGACGTAAAAGAGCTTATCAAAATTGCCTTCAACACCACCAATACAAAAATTAGTGATGAACTCAAAGAAACTAATCTTTAA 876 0.4178 MEIFRSQNRSNFLSSSNDAVSVPTIPLYRSAPALEVRLEDFESFAIDRLRVLKGISDGLSRGKKPDEMENLVKDLWKVNMRHQHASEVLNKDIISHFVLRLVYCRTEDLRKWFLSMESALFRYRFRLLNAEAQRAVMDEFDLPYRAVSNVEFESIKEKLGQVARSMGQPSPTADAIFYKKILKMSEGIEEKGKRIAIIVVSILILVAMIVAMTFGFNRDESDSNNDIEDTKKDNIVSTVKFVQTLCYPTNYKKECEKIVRVENTKDVKELIKIAFNTTNTKISDELKETNL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00871 291 PANTHER DNA PRIMASE LARGE SUBUNIT 1 286 - -
Cca10g00871 291 Gene3D - 3 184 - -
Cca10g00871 291 PANTHER DNA PRIMASE LARGE SUBUNIT 1 286 IPR007238 GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00871 Cca-Chr10 9981861 9987681 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00871 1 186 Core DNA Replication Machinery Family AT1G67320 59.574 4.38e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00871 K02685 - gmx:100806321 326.635