Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00865 ATGGAGCAGTCTCTGCTGAGAGGCGAAAGCAGTGACCAGAGCTACCGGCACCGGGGAATATTCCGCCGCTCCGATGCTATCACCCACGGCTCCAACTACGAGAAAGCCGCTGCGCTCGTCGATCTGGCTGAAGACGGTGTTGGTATCCCTGAGCAAATTCTTGATTCATCAAACTTCCAAAGTTATGCAAGATTTTATTTTATATTCACCAAATGCAATCTCATCTGGTCTCTCAGTTATTTTGCTTTGATAGTCCTGAATTTCCTGGAGAAACCTGTATGGTGTAAAAAGCTTACCACAAATTCTTGCAATGATAGAGAGTATTTCTTTTTGGGACAATTGCCGTATCTGACTGATGCAGAATGTCTTATTTATGAGGGAATAACTGTTGTTTTGCTAATCGCACATACGTTCTTCCCATTGGCATATGAAGGATCCCGTATATATTGGAAAAATATCATTAATCAATTGAAGGTTTTCTTTCTACTAGTTCTTGTCGCTGATATGCTGGTCTATGCCCTTTATTTGTCTCCACTGGCTTTTGATTTTCTACCTTTCAGAATTGCACCTTATATCAGGGTTGTTCTTTTCATTATGAATATTAGGGAGCTACGAGAAACTATCGTTATCTTGGCCGGGATGCTTGATACATACTTAAATATCTTGGCTTTGTGGCTTCTATTTCTTCTTTTTTCTAGTTGGGTGGCGTATGTGTTTTTTGAGGATACAATACAGGGGAAAACAGTATTCACTTCCTATGGTACTACATTTTATCAGCTGTTTCTTTTATTTACCACATCCAATAATCCAGATGTTTGGGTTCCTGCATACAAGTCTTCCCGATGGTATTGCCTGTTTTTCGTACTCTTTGTGCTAGTGGGGGTGTACTTTGTTACAAACTTGATCCTTGCTGTTGTTTATGACAGTTTCAAGAATGAGCTTGTAAAACAAGTTTTTGAGATGGATCGTATGAGAAGAACCATGTTGGAGAAAGCTTTTTATCTCTTAGATACACATAAAGTTGGATATCTCAACAAAGATCAATGCATTAGGCTCTTTGAGGAGTTGAACAAATATAGGACTTTGCCGAAAATCTCCAGGGAGGAATTTGAGTTAATATTTGATGAGCTTGATGATAGTCATGATATAAAGATCAACATGGATGAATTTGCTGATATTTGCAATGCTATTGCTTTAAAATTTCAGAAGGAAGATGTTATGTCTTACTTTGACTATTTAGCATTCTACCATTCACCCAGCTCAAAGAGATTAAAAGCATTTGTGAAGAGCCCTATGTTTGGATACCTGGTGTCCTTTGTTCTCATACTTAATCTGGTTGCTGTTATTATTGAGACAACGCTTGATATAGAAAACAATTCTGCTCAAATGGTGTGGCAAGTGGTTGAGTTTGTTTTTGGGTGGATATATGTAGTAGAAATGGTTTTAAAGATTTATTCATATGGATTTGAGAACTATTGGCGGGATGGGCAAAATCGCTTTGATTTTATTATCACGGTGATTATTGCCATTGGAGAAACTGTAACTTTTGCTTTACCTAATGATAATCTTCCTTTTATCTCAAATGGAGAATGGATTCGATACCTTCTTCTTGCAAGAATGTTGAGACTAATAAGGCTTCTAATGCATGTCAAGCGATACCGAGCCTTCGTGGCAACTTTCTTGACTCTCATACCAAGTTTGATGCCATACCTAGGGATCATATTTTGTGTCTTATGTATTTATTGCTCCCTTGGTGTACAGATTTTTGGTGGAATCGTTAATGCTGGAAACCCTGAATTGGAATTTACAGATCTTGCTGAGAATGACTATTTGGTTTTCAATTTCAATGATTTCCCAAATGGAATGGTGACACTTTTCAATTTTCTTGTCACGGCAACCTGA 1902 0.3796 MEQSLLRGESSDQSYRHRGIFRRSDAITHGSNYEKAAALVDLAEDGVGIPEQILDSSNFQSYARFYFIFTKCNLIWSLSYFALIVLNFLEKPVWCKKLTTNSCNDREYFFLGQLPYLTDAECLIYEGITVVLLIAHTFFPLAYEGSRIYWKNIINQLKVFFLLVLVADMLVYALYLSPLAFDFLPFRIAPYIRVVLFIMNIRELRETIVILAGMLDTYLNILALWLLFLLFSSWVAYVFFEDTIQGKTVFTSYGTTFYQLFLLFTTSNNPDVWVPAYKSSRWYCLFFVLFVLVGVYFVTNLILAVVYDSFKNELVKQVFEMDRMRRTMLEKAFYLLDTHKVGYLNKDQCIRLFEELNKYRTLPKISREEFELIFDELDDSHDIKINMDEFADICNAIALKFQKEDVMSYFDYLAFYHSPSSKRLKAFVKSPMFGYLVSFVLILNLVAVIIETTLDIENNSAQMVWQVVEFVFGWIYVVEMVLKIYSYGFENYWRDGQNRFDFIITVIIAIGETVTFALPNDNLPFISNGEWIRYLLLARMLRLIRLLMHVKRYRAFVATFLTLIPSLMPYLGIIFCVLCIYCSLGVQIFGGIVNAGNPELEFTDLAENDYLVFNFNDFPNGMVTLFNFLVTAT 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00865 633 SUPERFAMILY Voltage-gated potassium channels 430 631 - -
Cca10g00865 633 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Cca10g00865 633 Gene3D - 203 310 - -
Cca10g00865 633 Gene3D - 556 633 - -
Cca10g00865 633 SUPERFAMILY EF-hand 313 397 IPR011992 -
Cca10g00865 633 Pfam EF-hand domain pair 329 393 IPR002048 GO:0005509
Cca10g00865 633 Gene3D - 422 555 IPR027359 -
Cca10g00865 633 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 631 IPR044581 GO:0005245
Cca10g00865 633 Pfam Ion transport protein 132 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cca10g00865 633 Pfam Ion transport protein 431 631 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cca10g00865 633 Gene3D - 311 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00865 Cca-Chr10 9926163 9944706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00865 1 632 Ion Channels AT4G03560 68.246 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00865 K16900 - gmx:100806160 1144.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00865 10 9926163 9944706 Cca10g00865 10 9926163 9944706 ECH