Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00815 ATGAAGATTGCCTCCATCTTCACCAAGGCTTTCCACAGCTTCCCTTCATGCTACAAGCTTGTGCTACTCTGCACTCTAAGTGCACCAAGCTATGATTCTGTAACAGTTTTGGCCAACAATCCTGGTCAGTCTAGTTGGATGTCCAACATTCGGCAATATCTCACAGACGACTTGGCCGAGTTTCGAGTCAAAGATGATATCGACTCAGATGTTCATTATTGGCTCAGACTTAGCCAAGTTGCTGCACAACAGGGTACATATCTGGCTAGATGCTTTAACAGCAGGGATCAGTGTGCAGAGAATCCTGAAGGTCCAATAAGATTTGGAAAATCCGGACGTCATAAGTTTCGTCCCTTCAGGTATAAGCATTTTGGGCAATTTGCTCCTCTTGGTGGAGAGCAGGCAGCTGCAGAACTTCCTGGAGACTGGGTTTCCATGGGTCACAGCACTCAATGGCTCTGGTATTCTATATATGCAAGCAAACAAGTGAGCTGGCGCACAAGGGTGTTAGTCATCTCAGATTGGACAAGAAGATTCGTCTTTGGTAGAGATTCTAGTCGTATATAA 567 0.455 MKIASIFTKAFHSFPSCYKLVLLCTLSAPSYDSVTVLANNPGQSSWMSNIRQYLTDDLAEFRVKDDIDSDVHYWLRLSQVAAQQGTYLARCFNSRDQCAENPEGPIRFGKSGRHKFRPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSIYASKQVSWRTRVLVISDWTRRFVFGRDSSRI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00815 188 PANTHER - 65 188 - -
Cca10g00815 188 PANTHER NADH DEHYDROGENASE 65 188 IPR045024 GO:0003954|GO:0006116
Cca10g00815 188 Gene3D - 60 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00815 Cca-Chr10 9366527 9371098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00815 67 188 Chloroplast and Mitochondria Gene Families AT4G21490 73.770 7.86e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00815 K03885 - ccaj:109817627 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00815 10 9366527 9371098 Cca10g00815 10 9366527 9371098 ECH