Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00798 ATGCATGATGATGACACGTTTGTTTTCCCATTGTTGGCTTTGCAAGTCACGGTTTTCCCCAACCGTGGCCTTTGCATTGCGATCACATATTGCCACGTGATGGATGATAGGTGTTGCAGCCATTTCATGAAGACTTGGTCTTCCATTTGTCGAAGTGGTGGAGTTGATTTGACACTTTTGGAGAACTCACCACCGTGCTTTGATAGGGAAGTGTTGAGAGACACCAAAGGACTCGAGACCATTTTCTTGAGAGACTACTTTGAAGCGAGGTCAACATGGAAGGTCGGTCCAATTCCTAAACATGGAGCTGATGATGAGGACTATGTTAAGGCAACGATTACTTTTGGAAGAGATGATATTGAAAGCATGAAAAAATGGGCGTTGAATCGGTGGAAAAAAGATGACGAATTTCAAGCGCCGCAATATCTATCAAAATTTGTGGTGACGTGTGCCTTCATGTGGGTTAGCTTGGTTAAAGCAAAATATAGAAAGGATGATGATGAAGTAGCAGAGATGAAAGAAGAGTACTTCCATTTTGCAGCAGATTGTAGAGATCGACTTGAGTATCCGATACCAGCGACTTACTTCGGAAATTGCTTAACGATATGTCATGTAGCGCTAAAGAGAAAAGACCTAAAGGGAGAAGGTGGTTTTATGAACGCAGTGAAGGCCATTGCAAAGACAATAACTGATATGAAAACTGAACCTCTGAAAGGTGCAGAAAACTGGAAGGAATTGTTTATGATGTTTCTATCGGGAAGAATAGCCATAGTTACAGGATCACCTAAGTTCACTGTTTATGAGACTGACTTTGGATTTGGAAAACCTACGAAAGTGGAGATGGTACATCCTCGTATGTGTGTGTCTTTTGCCGAAAGTGGAGACAAGGAAGGTGGATTAGAGCTTGGCTTGGTAGTCAGAAGTGAGGAATTTAAATATTACATTTCAGCTGCCATTGACCAAGGGCTTGTAACATTAAAATCTTAA 987 0.4154 MHDDDTFVFPLLALQVTVFPNRGLCIAITYCHVMDDRCCSHFMKTWSSICRSGGVDLTLLENSPPCFDREVLRDTKGLETIFLRDYFEARSTWKVGPIPKHGADDEDYVKATITFGRDDIESMKKWALNRWKKDDEFQAPQYLSKFVVTCAFMWVSLVKAKYRKDDDEVAEMKEEYFHFAADCRDRLEYPIPATYFGNCLTICHVALKRKDLKGEGGFMNAVKAIAKTITDMKTEPLKGAENWKELFMMFLSGRIAIVTGSPKFTVYETDFGFGKPTKVEMVHPRMCVSFAESGDKEGGLELGLVVRSEEFKYYISAAIDQGLVTLKS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00798 328 Gene3D - 105 319 IPR023213 -
Cca10g00798 328 Pfam Transferase family 9 285 - -
Cca10g00798 328 Gene3D - 1 98 IPR023213 -
Cca10g00798 328 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 328 - -
Cca10g00798 328 PANTHER - 3 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00798 Cca-Chr10 9251143 9252129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00798 2 314 Monolignol Biosynthesis Gene Families AT5G48930 24.615 4.45e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00798 - - ccaj:109817643 683.715