Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00797 ATGGCAGAGGCAACAACAAATAAACTTGTAGAGAAATCTCAAGTTGCTCCAGTTACAACCAAAACCACGTCTCTTCCCCTATCATTCCTGGACTTAACTTATACAGGTTCTCGTTACTATGTGAGACGCCAATTCTTCTATGACTTTCCCCATCCCACACACATTTTCTATGAAACTAAACTCCCCTCTCTCAAACACACACTCTCTCTTACCCTTCAACATTTTTACCCTCTCGCTGGAAATCTCCTTTGTCCCCCACCACCCCACAAACCCTTCATTCGCTGCACCGATCATGACTCTGTCACCTTAACTGTCACTGAGTCCCAAGCTGATTTCAACCTTCTCTCATCCAACCACCCCAAAAGTCTCAAAGATTTGGGTAAATTGGTTCCCAACTTGTCATGCACAACTGTGCCTAATGACACGTTCGTTTCCCCATTGTTGGCCCTGCAAATCACGGTTTTCCCCAACTGTGGCCTTTGCATCTCGATCACGTATTGCCATGCAATCATGGATGGTAGGTGTTGCTGTTATTTCATGAAGTGTTGGTCTTCCATTTGTCGAAGTGGTGGAGTTGATTTGACACTTTTGGAGATCTCACCGCCATGCTTTGATAGGGAAGTGTTGAGAGACACCAAAGGACTCGAGGCCATTTTCTTGAGAGACTACTTTGAAGCAAGGTCGACATGGAAGGTTGGTCCAATTCCTAAACATGGAATTGATGATGAGGGCTATGTTAAGGCAACGATTACTTTTGGAAGAGATGATATTGAGGCCATGAAAAAATGGGCGTTGAATCAGTGGAAAAAAGATGATAAATTTCAAGCGCCGCAATATCTATCAAAATTTGTGGTGACGTCTGCTTTCTTGTGGGTTAGCTTGGTTAAAGCAAAATATAGAAACGACAACGAAGAAGAACAAGTAGAGATGATAGAGGACTACTTCCGTTTTGCAGCAGATTGTAGAGATCGCCTTGAGTACCCGATACCAGCGACTTACTTTGGAAATTGCTTGGCGAGATGTTATGTAGGGCTGAAGAGAAAGGACCTAAAGGGAGAAGGTGGTTTTGTGAACGCAGTGAAGGCCATTGTAAGGACAATAGCTGATATGAAAACTGAACCTCTGAAAGGTGCAGAAAATTGGAAGGAATTGTTTATAAAGACGTTTCTACCGGGACGTTTAGTGTTAGTTACAGGATCACCTAAGTTCAATGTTTACGAGACTGACTTTGGATTTGGAAAACCTACCAAAGTCGACGTTGCACATTCCAGTATGTTTTTGTCTTTTGTCGAAAGTAGAGACAAAGAAGGAGGATTAGAGGTTGGCTTGGTATTTAGAAGTGAGGAATTTGAATATTACATTACTGTCATTGAGCAAGGACTTGTAACATTAAAATCTTAA 1401 0.4226 MAEATTNKLVEKSQVAPVTTKTTSLPLSFLDLTYTGSRYYVRRQFFYDFPHPTHIFYETKLPSLKHTLSLTLQHFYPLAGNLLCPPPPHKPFIRCTDHDSVTLTVTESQADFNLLSSNHPKSLKDLGKLVPNLSCTTVPNDTFVSPLLALQITVFPNCGLCISITYCHAIMDGRCCCYFMKCWSSICRSGGVDLTLLEISPPCFDREVLRDTKGLEAIFLRDYFEARSTWKVGPIPKHGIDDEGYVKATITFGRDDIEAMKKWALNQWKKDDKFQAPQYLSKFVVTSAFLWVSLVKAKYRNDNEEEQVEMIEDYFRFAADCRDRLEYPIPATYFGNCLARCYVGLKRKDLKGEGGFVNAVKAIVRTIADMKTEPLKGAENWKELFIKTFLPGRLVLVTGSPKFNVYETDFGFGKPTKVDVAHSSMFLSFVESRDKEGGLEVGLVFRSEEFEYYITVIEQGLVTLKS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00797 466 Gene3D - 243 462 IPR023213 -
Cca10g00797 466 Gene3D - 7 235 IPR023213 -
Cca10g00797 466 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 466 - -
Cca10g00797 466 PANTHER - 1 466 - -
Cca10g00797 466 Pfam Transferase family 19 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00797 Cca-Chr10 9245953 9247538 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00797 11 453 Monolignol Biosynthesis Gene Families AT5G48930 23.871 7.76e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00797 - - gmx:100813271 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00797 10 9245953 9247538 Cca10g00797 10 9245953 9247538 ECH