Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00796 ATGCATGATGATGACACGTTTGTTTTCCCATTGTTGGCCTTGCAAGTCACGGTTTTCCCCAACCGTGGCCTTTGCATTGCGATCACATATTGCCACGTGATGGATGATAGGTGTTGCAGCCATTTCATGAAGACTTGGTCTTCCATTTGTCGAAGTGGTGGAGTTGATTTGACACTTTTGGAGAACTCACCACCGTGCTTTGATAGGGAAGTGTTGAGAGACACCAAAGGACTCGAGACCATTTTCTTGAGAGACTACTTTGAAGCGAGGTCAACATGGAAGGTCGGTCCAATTCCTAAACATGGAGCTGATGATGAGGACTATGTTAAGGCAACGATTACTTTTGGAAGAGATGATATTGAAAGCATGAAAAAATGGGCGTTGAATCGGTGGAAAAAAGATGACGAATTTCAAGCGCCGCAATATCTATCAAAATTTGTGGTGACGTGTGCCTTCATGTGGGTTAGCTTGGTTAAAGCAAAATATAGAAAGGATGATGATGAAGTAGCAGAGATGAAAGAAGAGTACTTCCATTTTGCAGCAGATTGTAGAGATCGACTTGAGTATCCGATACCAGCGACTTACTTCGGAAATTGCTTAACGATATGTCATGTAGCGCTAAAGAGAAAAGACCTAAAGGGAGAAGGTGGTTTTATGAACGCAGTGAAGGCCATTGCAAAGACAATAACTGATATGAAAACTGAACCTCTGAAAGGTGCAGAAAACTGGAAGGAATTGTTTATGATGTTTCTATCGGGAAGAATAGCCATAGTTACAGGATCACCTAAGTTCACTGTTTATGAGACTGACTTTGGATTTGGAAAACCTACGAAAGTGGAGATGGTACATCCTCGTATGTGTGTGTCTTTTGCCGAAAGTGGAGACAAGGAAGGTGGATTAGAGCTTGGCTTGGTAGTCAGATAA 924 0.4221 MHDDDTFVFPLLALQVTVFPNRGLCIAITYCHVMDDRCCSHFMKTWSSICRSGGVDLTLLENSPPCFDREVLRDTKGLETIFLRDYFEARSTWKVGPIPKHGADDEDYVKATITFGRDDIESMKKWALNRWKKDDEFQAPQYLSKFVVTCAFMWVSLVKAKYRKDDDEVAEMKEEYFHFAADCRDRLEYPIPATYFGNCLTICHVALKRKDLKGEGGFMNAVKAIAKTITDMKTEPLKGAENWKELFMMFLSGRIAIVTGSPKFTVYETDFGFGKPTKVEMVHPRMCVSFAESGDKEGGLELGLVVR 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00796 307 Gene3D - 1 98 IPR023213 -
Cca10g00796 307 PANTHER - 3 307 - -
Cca10g00796 307 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 307 - -
Cca10g00796 307 Pfam Transferase family 9 283 - -
Cca10g00796 307 Gene3D - 105 307 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00796 Cca-Chr10 9241475 9242398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00796 2 276 Monolignol Biosynthesis Gene Families AT5G48930 24.912 1.09e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00796 - - ccaj:109817643 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00796 10 9241475 9242398 Cca10g00796 10 9241475 9242398 ECH