Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00795 ATGGCAGAGCCTAGTGCACATAAGCTTGTTGAGAAATCTGAGGTTACTCCAGCAGTGACAACAACCACCTCTCTTCCCCTCACATTCCTAGATTTGCCTTTGACAGGTCCTATTTATGTGAGACGCCAATTCTTCTATCACTTTTCCCACCCAACACACATTTTCTACCAAACTACACTTCCCTCTCTCAAACACTCTCTCTCTCTTACACTTGAACGTTTCTTCCCTCTTGCTGGAAATCTCCTCTGTCCTCCACCACCCCACAAGCCCTTCATTCGTTGCACCGATCATGACTCTGTCACCTTAACCATCATCGAGTCCAGAGATGATTTCAACCATCTTTCCTCAAACCACCCCAAAAGTCTCAAGGACTTGGATCACTTGGTTCCAAAGTTAACATGCACAAACACGCATGATGGCAAGTTCGTTTTCCCATTGTTGGCCTTGCAAGTCACGGTTTTCCCCAACCGTGGCCTTTGCATAGCCATCACTTATTGCCACATGATGGATGATAGGTGTTGCAGCCATTTCATGAAGTCTTGGTCTTCCATCTGTCTAAGCGGTGGCGTTGACTTGACACTTGTGGAGAAGTCTCCACCTTGCTTTGATAGGGAAGTGTTGAAGGACCCCAAGGGACTCGAGGCTATTTTCTTGGGAAACTATTTTGAAGAGAGGTCAACTTGGAAGGACAAACTCGTAGGTAAGACAACCACTACTTCTGAGATTTCCACTGGAAATAATGAAGATTATGCCAAAGCAACAATTGTGTTTGGAAGAGATGATATCGAGGGGCTGAAAAGATATGTGCTGAATCAGAGGAAAGAAAAAGATGAATTCAAAGCACCACAATATCTATCAAAATTTGTGGTGACGTGTGCTTTCGTGTGGGTTAGCTTAGTGAAAGCAAAACATAGAGATGATGATAATGATGAAGAAGGAGAAGAGGTAAAAGAGGAGTACTTTCGTTTTGCAGCAGATTGTAGAGATCGCTTTGAGTACCCTGTACCGGCAACGTACTTCGGAAATTGCTTAACAAAATGTTATGCAGTGCTCAAGAGAAAGGAGCTCAAGGGAGAAGGTGGTTTTTTGAAGGCGGTGAAGGCTATTGCAAGAGCAATAACTGATATGAAAACTGAACCTCTTAAAGGTGCAGAAAATTGGAGGGCATTATTGAGGAAGATATCTGTATTGGGAAATACGGTACTAGTTACAGGGTCACCTAACTTCACTGTTTATGAGACTGATTTTGGGTTTGGAAAACCTACCAAAGTCGAGATGGTACATTCCCCTAAGTGCATGTCTCTTGCTGAAAGTGGGGACAAAGAAGGAGGATTAGAGCTTGGCTTGGTTTTTAGAAGTGGGGAATTTGAATATTTCATTTCTGTCATTGAGCGAGGACTCGCAACATTAAAATCCTAA 1419 0.432 MAEPSAHKLVEKSEVTPAVTTTTSLPLTFLDLPLTGPIYVRRQFFYHFSHPTHIFYQTTLPSLKHSLSLTLERFFPLAGNLLCPPPPHKPFIRCTDHDSVTLTIIESRDDFNHLSSNHPKSLKDLDHLVPKLTCTNTHDGKFVFPLLALQVTVFPNRGLCIAITYCHMMDDRCCSHFMKSWSSICLSGGVDLTLVEKSPPCFDREVLKDPKGLEAIFLGNYFEERSTWKDKLVGKTTTTSEISTGNNEDYAKATIVFGRDDIEGLKRYVLNQRKEKDEFKAPQYLSKFVVTCAFVWVSLVKAKHRDDDNDEEGEEVKEEYFRFAADCRDRFEYPVPATYFGNCLTKCYAVLKRKELKGEGGFLKAVKAIARAITDMKTEPLKGAENWRALLRKISVLGNTVLVTGSPNFTVYETDFGFGKPTKVEMVHSPKCMSLAESGDKEGGLELGLVFRSGEFEYFISVIERGLATLKS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00795 472 Gene3D - 7 233 IPR023213 -
Cca10g00795 472 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 472 - -
Cca10g00795 472 Gene3D - 247 469 IPR023213 -
Cca10g00795 472 PANTHER - 1 472 - -
Cca10g00795 472 Pfam Transferase family 11 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00795 Cca-Chr10 9233890 9235484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00795 48 421 Monolignol Biosynthesis Gene Families AT5G48930 23.232 4.33e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00795 - - gmx:100813271 779.63