Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00794 ATGCATGATGATGACACGTTTGTTTTCCCATTGTTGGCCTTGCAAGTCACGGTTTTCCCCAACCGTGGCCTTTGCATAGCGATCACATATTGCCACGTGATGGATGATAGGTGTTGCAGCCATTTCATGAAGACTTGGTCTTCCATTTGTCGAAGTGGTGGAGTTGATTTGACACTTTTGGAGAACTCACCACCGTGCTTTGATAGGGAAGTGTTGAGAGACACCAAAGGACTCGAGACCATTTTCTTGAGAGACTACTTTGAAGCGAGGTCAACATGGAAGGTCGGTCCAATTCCTAAACATGGAGCTGATGATGAGGACTATGTTAAGGCAACGATTACTTTTGGAAGAGATGATATTGAAAGCATGAAAAAATGGGCGTTGAATCGGTGGAAAAAAGATGACGAATTTCAAGCGCCGCAATATCTATCAAAATTTGTGGTGACGTGTGCCTTCATGTGGGTTAGCTTGGTTAAAGCAAAATATAGAAAGGATGATGATGAAGTAGCAGAGATGAAAGAAGAGTACTTCCATTTTGCAGCAGATTGTAGAGATCGACTTGAGTATCCGATACCAGCGACTTACTTCGGAAATTGCTTAACGATATGTCATGTAGCGCTAAAGAGAAAAGACCTAAAGGGAGAAGGTGGTTTTATGAACGCAGTGAAGGCCATTGCAAAGACAATAACTGATATGAAAACTGAACCTCTGAAAGGTGCAGAAAACTGGAAGGAATTGTTTATGATGTTTCTATCGGGAAGAATAGCCATAGTTACAGGATCACCTAAGTTCACTGTTTATGAGACTGACTTTGGATTTGGAAAACCTACGAAAGTGGAGATGGTACATCCTCGTATGTGTGTGTCTTTTGCCGAAAGTGGAGACAAGGAAGGTGGATTAGAGCTTGGCTTGGTAGTCAGAAGTGAGGAATTTAAATATTACATTTCAGCTGCCATTGACCAAGGGCTTGTAACATTAAAATCTTAA 987 0.4164 MHDDDTFVFPLLALQVTVFPNRGLCIAITYCHVMDDRCCSHFMKTWSSICRSGGVDLTLLENSPPCFDREVLRDTKGLETIFLRDYFEARSTWKVGPIPKHGADDEDYVKATITFGRDDIESMKKWALNRWKKDDEFQAPQYLSKFVVTCAFMWVSLVKAKYRKDDDEVAEMKEEYFHFAADCRDRLEYPIPATYFGNCLTICHVALKRKDLKGEGGFMNAVKAIAKTITDMKTEPLKGAENWKELFMMFLSGRIAIVTGSPKFTVYETDFGFGKPTKVEMVHPRMCVSFAESGDKEGGLELGLVVRSEEFKYYISAAIDQGLVTLKS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00794 328 Gene3D - 105 319 IPR023213 -
Cca10g00794 328 Pfam Transferase family 9 285 - -
Cca10g00794 328 Gene3D - 1 98 IPR023213 -
Cca10g00794 328 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 328 - -
Cca10g00794 328 PANTHER - 3 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00794 Cca-Chr10 9197164 9198150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00794 2 314 Monolignol Biosynthesis Gene Families AT5G48930 24.615 4.45e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00794 - - ccaj:109817643 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00794 10 9197164 9198150 Cca10g00794 10 9197164 9198150 ECH