Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00786 ATGATTATCGGGATAGGTAGGATTCCCGCTTTGGGTGTTGGAAGTAATAGATTGGCCAATTCCATAATGCATTTCAGCAACACTTTTATTGGCCTGGGGACAGTCCACACTTTGAGGGAGGAGAGGAGCAGCAGCAGCCAATGCCAGAGGAGGAGCAACAGCAAGAAGGTGGAGAGAGGGAGCTCCGGTCCCCAGCCACATTTCTGTGAAACCACACTCCCCACTCTCAAACACTCTCTCTCTCTTACCCTTCAACATTTTTTCCCTCTCGCTGGAAATCTCCTCTGTCCACCACCACCCCACAAACCCTTCATTCGCTGCACCGATCATGACTCTGTCACCTTCACCATCATTGAGTCCCAAGCTGATTTCCAACTTCTCTCATCCAACCACCCCAAAAGTCTCAAAGACTTGGATCACTTGGTTCCTACGTTGACATTCACAAACGTGCATGATGATGACACGTTCACTTTCCCTTTAGTGGCATTGCAAGTCACAGTTTTCCCCAACCATGGCCTTTGCATCGCCATCACATATTGTCATGTGATGGATGGTAAGTGTTGCAGTCATTTCATGAAGTGTTGGTCTTCCATTTGTCGAAGCGGTGGCGTTGACTTGACACTTGTGGAGAAGTCTCCACCGTGCTTTGCTAGGGGAGTGTTGAAGGACCCCAATGGACTCGAGGCCATTTTCTTAAGAGACTATTTTGAAGAGAGGTCAACTTGGAAGGAAAAACTCATTGGTCAAACTTATAAAAGTTCCGGTGGTGATGCTGATGAGGACTTTGTTAAGGCAACGATTGTTTTTAGAAGAGATGACATCGAGAGGCTGAAAAGATGGGTGTTGGACCAGTGGAAGGAAAGTGAGGAATTCAACGTGCCACAATATGTATCAAAATTTGTGGTGACGTGTGCTTTTGTGTGGGCTTGTTCGGTTagaacaagatgcagaaatgatgaagaagaaaaggagaaAGAGGAGTATTTTCGTTTTGCTGCAGATTGCAGAGATCGCCTTGAGTATCCTGTGCCAAAAACATATTTTGGAAACTGCTTAACGTTATGTTATGCAATGCTAAAGAGAAAGGATCTCAAGGGAGAGAGTGGTTTTGTGAATGCGGTCAAGGCCATTGAAAAGGCATTGACTGATATGAGAAGTGAACCCTTTAAAGATGCAGAAAACTGGAGGGCGTCGTTTAAGAAGATGTTTGTGTTGGGAAGTACATTGCTAGTTACAGGGTCACCCAACTTCACTGTTTATGAGACTGATTTTGGATTTGGAAGGCCTAACAAAGTGGAAATGGTGCATCCCTTTAAGTGCATGTCTCTAACTGAAAGTGGAGATGAGGAAGGAGGACTTGAGGTTGGCTTTGTGTGTAGAAGTACCGAATTTGAATATTTCGTTTCTGTCATCGAACAAGAACTTAAAGCTTCCAAATCCTAA 1443 0.438 MIIGIGRIPALGVGSNRLANSIMHFSNTFIGLGTVHTLREERSSSSQCQRRSNSKKVERGSSGPQPHFCETTLPTLKHSLSLTLQHFFPLAGNLLCPPPPHKPFIRCTDHDSVTFTIIESQADFQLLSSNHPKSLKDLDHLVPTLTFTNVHDDDTFTFPLVALQVTVFPNHGLCIAITYCHVMDGKCCSHFMKCWSSICRSGGVDLTLVEKSPPCFARGVLKDPNGLEAIFLRDYFEERSTWKEKLIGQTYKSSGGDADEDFVKATIVFRRDDIERLKRWVLDQWKESEEFNVPQYVSKFVVTCAFVWACSVRTRCRNDEEEKEKEEYFRFAADCRDRLEYPVPKTYFGNCLTLCYAMLKRKDLKGESGFVNAVKAIEKALTDMRSEPFKDAENWRASFKKMFVLGSTLLVTGSPNFTVYETDFGFGRPNKVEMVHPFKCMSLTESGDEEGGLEVGFVCRSTEFEYFVSVIEQELKASKS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00786 480 Pfam Transferase family 71 469 - -
Cca10g00786 480 Gene3D - 59 247 IPR023213 -
Cca10g00786 480 Gene3D - 259 478 IPR023213 -
Cca10g00786 480 PANTHER - 65 480 - -
Cca10g00786 480 MobiDBLite consensus disorder prediction 40 67 - -
Cca10g00786 480 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 65 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00786 Cca-Chr10 9131396 9132948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00786 75 467 Monolignol Biosynthesis Gene Families AT5G48930 24.146 7.98e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00786 - - ccaj:109791571 680.633