Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00774 ATGGGAATAGCTAGGAAATGTTCATATTGTGGTAACTTGGGTCACAATGCAAGGACTTGTAAAAGTCTCAGTCACAGACAACTAAAGCTCTTCGGAGTGCAACTTGATGTTTATTCTTCTTCATCATTACCTTCGTATTCTGCCACCCAAACAAGTTTCAGCACCAACTACTTGttctcttcgcctgtatcctcctccttttcctcgccttccctgcctcctGCAAATGATAATTCAGATAGTTACTTCCTAGACACAAAAAAAGGTGTGTCGTGGACAGAGGAGGAACATCAAATATTTCTTGCAGGGCTTGAGAAGTTGGGGAAGGGAAACTTGAGAGGCATGTCTAGAAGCTTTGTCACAACAAGAACGTCTACCCAAGTTGATAGGCACGCACAAAAGTATTTTCTCCGTCAATCAAACAATACACTCAATAGAACAAAACACCGTTCCACCCTATTTCATGGGCTCTCTCAGGGGCTCTCGCATCCTCATTCAGTGCTGAATTGGCCTATCACTTCAAATGATTGTACGTTCCAGAGCGTGTTCCTGGATTTAGAACTCAAACTTGCAACTCCCAAGCCATTGGAGCTGCCTTTTTAA 603 0.3897 MGIARKCSYCGNLGHNARTCKSLSHRQLKLFGVQLDVYSSSSLPSYSATQTSFSTNYLFSSPVSSSFSSPSLPPANDNSDSYFLDTKKGVSWTEEEHQIFLAGLEKLGKGNLRGMSRSFVTTRTSTQVDRHAQKYFLRQSNNTLNRTKHRSTLFHGLSQGLSHPHSVLNWPITSNDCTFQSVFLDLELKLATPKPLELPF 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00774 200 PANTHER TRANSCRIPTION FACTOR KUA1 4 157 - -
Cca10g00774 200 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
Cca10g00774 200 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 157 - -
Cca10g00774 200 SUPERFAMILY Homeodomain-like 86 141 IPR009057 -
Cca10g00774 200 Gene3D - 90 141 - -
Cca10g00774 200 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
Cca10g00774 200 SMART sant 88 138 IPR001005 -
Cca10g00774 200 ProSiteProfiles Zinc finger CCHC-type profile. 5 22 IPR001878 GO:0003676|GO:0008270
Cca10g00774 200 CDD SANT 91 136 IPR001005 -
Cca10g00774 200 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 87 139 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00774 Cca-Chr10 8893034 8894256 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Cca10g00774 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00774 - - gmx:100795143 240.35