Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00765 ATGAGAAGTGATGAGAttgtgttgttgttgttgttctcatttcttgtatgttgttCCGGTGGAGATACTTTGAAGGCTGGCGAGAATATAACTGATGAGGAGGGGAACCCGAATCTTGTTTCAGAGAACCTCACATTTGAGCTTGGCTTTTTTCCTTTAAGTGAGAAAAGATACTTGGGGATATGGTATCATATGAAACCACGAACAGTGGTATGGGTTGCGAATAGAGAGAAGGGTGTTTTAGATTCCAGCGGAGTTTTTGAAATCGCAGAGGATGGAAATCTGGTGGTGGAAGGCAAAGGTGCATCAGGGAGGAGTAATTATTGGTCCTCTCAACTTGAAGCCTCCTCGTCCACAAACAGAACAGTGAGGCTCCTAGATTCAGGGAACCTCGTACTCATGGACCACGATAGAAAGTTGTTGTGGCAGAGCTTCCTGAACCCAACAGACACCTTTCTCCCTGGCATGAAAATGGAAGCTAATTTAACGTTGACTTCATGGAGAGACGCCACTGACCCAGCACCTGGGGACTTCACCTTTAAGCTCTCTCGTGCTCAAAACTTCCAAGTGGAAAGGAAATCTCAACTTTACTGGGCATTTGATCGACTCGACACAGAAACGGTTCCCCCAATGATCTTTCTGTTGTTAGACAACGGCACGATGGGTACTAGTACTAATACTTCATCGTACAATAATAGATCAGGGAAAGTGATGAATGGATCGCAATCTTACGACTACAAGAGATCAAGGCTATTAATGAATTATTCTAGCGGGGAGATAGAGTTTCTGAAGTGGAATGAGACATTGTTTGGATGGGATAAGCTCTGGTGGGGGCCAGCTGACAAGTGCGACAAACATAACTATTGCGGGAGCTTTGGAATCTGTAACAAAAATAATGTGGTTCGCTGCAAATGTTTGCCAGGGTTCCGTCCGAAGCATAATGAGAAGGAGGAAGAATTCCAGCTACAAGGGTGTGTCAGAAAATCAACGACGTCGTGTATTGACAAGGATGTCATGTTCCTGAATTTTGGCTGGATAAATGTGGACAGCGAGCCTGATCAGCAATTTAATACACAAACAGAAGCAGAATGCCAATCTTTATGCCATGATAATAGCAAGTGTCCCAGGTCTCAGTGCCAGGCATATTCATTTTCTAGGTCTATATATGATCGCGGTTCTTCCTCTACATGCAAGATCTGGACACGAGATTTACCTACTCTTCTCGAGGACTACGATCGTGGTCTTGATCTTTCTGTCCTCGTTAATAGATCAGATATAGAACTCACTGCAAGATCGTGTAAACCTTGCGGCACAAATGTGATTCCTTATCCGCTAAGCACAGGGCCAGACTGTGGTAACCCCATGTACAACAGGTTTAATTGCAGCAACTCCACAGGCCAAGTTAGATTTATGATACCCGACGGAGACTCATACCCAGTTAATACGATCGATGAAGATACCAGAGTGTTTTACATTCAAACTCCTGGTTCATATTCCTGTAGTTCCGGAAATCAAACTGCCACACCTGATTATCCATTTTATGAATATGCTTGCTTTGAAGATGTTGGAATAGTTAAAATGAGTTGGCTACCAGCACCAGAACCTCCCTGCACTAAGCCTATAGACTGCAAGTATTGGCCCCATTCGACATGCACACCATCAAGTCAAGGAGGAACCAGATGCCTTTGTGATCCAACCTTTAAGTGGAATAACTCAACCATCAAGTGCACCCAAGAAGCGCCATCAAACCATTCAACCATCAGACTGCTATTGATATTAACTCTTGGTGGCACGGCTATTCTGGCATGCATAATTGCATTTGCCATTGTGCGAAGAATGAGAAAAAACCATACGCTAGATCGGGCAAACACCCGAATTCAGGAGAGCTTGTATGAGAGTGAAAGACATGTGAAAGGTTTGATTGGGTTAGGAAGTTTAGAAGAAAAAGGCATTGAAGGCATTGAAGTACCCTGTTATACTTTTGCAAGCATTCTAGCAGCTACAGATAATTTCTCAGATTCTAACAAGCTTGGGAGAGGAGGTTATGGACCTGTCTATAAGGGAAGGTTTCCTGGAGGTCAATATATAGCTGTAAAGAGGCTTTCAAGTGTTTCTACTCAAGGCTTACAGGAATTCAAGAATGAGGTTATTTTGATTGCAAAACTTCAACATCGGAACCTCGTTAGACTTAGGGGCTATTGCATAAAAGGATATGAAAAAATCTTACTTTATGAATACATGTCCAACAAGAGCTTGGACTCATTTATATTTGACCGGACACGAACCTTACTCTTGGATTGGCCAATGCGGTTTGAGATAATTATAGGCATTGCGCGAGGCATGCTCTATCTTCACCAAGATTCCAGGTTGAGAGTGATTCATAGAGACCTGAAAACCAGCAACATTCTTCTAGATGAGGAGATGAATCCAAAGATATCAGACTTTGGCCTTGCTAAAATATTTGGGGGGAAAGAAACTGAAGCAAGTACAGAGAGAGTTGTGGGAACCTACGGATATATGGCTCCGGAGTATGCTTTGGATGGACTTTTTTCAATCAAATCCGATGTTTTCAGCTTTGGAGTAGTCTTACTTGAGATTATTAGTGGAAAAAAGAACACGGGATTCTATCAGTCCAAACAAATTTCTAGCCTTTTGGGTTATACATGGAAGTTATGGACAGAAAATAAGCTACTGGATTTAATGGAGCCATCGTTTGCTGAAAGTTGCAACGAAAATCAATTCATTAAGTGTGCGCTTATTGGACTCTTGTGCATACAAGATGAACCAGGTGATCGACCCACTATGTCAAATGTTTTGACAATGCTTGATAGCGAGACTGCATCCATGCCACTTCCCACGCAGCCAACTTTTTTTGTGAACAAACATCTTTCTAGCTCAGCTTCTTCTTCTAGCAAACCAGAGACAAGCCTGCAATTTGATACCAGTTACCAAGACGGTCGATAG 2964 0.4217 MRSDEIVLLLLFSFLVCCSGGDTLKAGENITDEEGNPNLVSENLTFELGFFPLSEKRYLGIWYHMKPRTVVWVANREKGVLDSSGVFEIAEDGNLVVEGKGASGRSNYWSSQLEASSSTNRTVRLLDSGNLVLMDHDRKLLWQSFLNPTDTFLPGMKMEANLTLTSWRDATDPAPGDFTFKLSRAQNFQVERKSQLYWAFDRLDTETVPPMIFLLLDNGTMGTSTNTSSYNNRSGKVMNGSQSYDYKRSRLLMNYSSGEIEFLKWNETLFGWDKLWWGPADKCDKHNYCGSFGICNKNNVVRCKCLPGFRPKHNEKEEEFQLQGCVRKSTTSCIDKDVMFLNFGWINVDSEPDQQFNTQTEAECQSLCHDNSKCPRSQCQAYSFSRSIYDRGSSSTCKIWTRDLPTLLEDYDRGLDLSVLVNRSDIELTARSCKPCGTNVIPYPLSTGPDCGNPMYNRFNCSNSTGQVRFMIPDGDSYPVNTIDEDTRVFYIQTPGSYSCSSGNQTATPDYPFYEYACFEDVGIVKMSWLPAPEPPCTKPIDCKYWPHSTCTPSSQGGTRCLCDPTFKWNNSTIKCTQEAPSNHSTIRLLLILTLGGTAILACIIAFAIVRRMRKNHTLDRANTRIQESLYESERHVKGLIGLGSLEEKGIEGIEVPCYTFASILAATDNFSDSNKLGRGGYGPVYKGRFPGGQYIAVKRLSSVSTQGLQEFKNEVILIAKLQHRNLVRLRGYCIKGYEKILLYEYMSNKSLDSFIFDRTRTLLLDWPMRFEIIIGIARGMLYLHQDSRLRVIHRDLKTSNILLDEEMNPKISDFGLAKIFGGKETEASTERVVGTYGYMAPEYALDGLFSIKSDVFSFGVVLLEIISGKKNTGFYQSKQISSLLGYTWKLWTENKLLDLMEPSFAESCNENQFIKCALIGLLCIQDEPGDRPTMSNVLTMLDSETASMPLPTQPTFFVNKHLSSSASSSSKPETSLQFDTSYQDGR 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00765 987 Gene3D Phosphorylase Kinase; domain 1 646 746 - -
Cca10g00765 987 ProSiteProfiles Protein kinase domain profile. 671 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g00765 987 SMART blect_4 27 148 IPR001480 -
Cca10g00765 987 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 173 IPR036426 -
Cca10g00765 987 Pfam D-mannose binding lectin 69 163 IPR001480 -
Cca10g00765 987 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 14 985 - -
Cca10g00765 987 MobiDBLite consensus disorder prediction 964 987 - -
Cca10g00765 987 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 985 - -
Cca10g00765 987 ProSiteProfiles Bulb-type lectin domain profile. 15 146 IPR001480 -
Cca10g00765 987 CDD B_lectin 39 148 IPR001480 -
Cca10g00765 987 Pfam S-locus glycoprotein domain 237 312 IPR000858 GO:0048544
Cca10g00765 987 Gene3D - 17 145 IPR036426 -
Cca10g00765 987 SMART serkin_6 671 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g00765 987 CDD STKc_IRAK 677 943 - -
Cca10g00765 987 ProSiteProfiles PAN/Apple domain profile. 333 433 IPR003609 -
Cca10g00765 987 SUPERFAMILY Protein kinase-like (PK-like) 656 978 IPR011009 -
Cca10g00765 987 Pfam Protein tyrosine and serine/threonine kinase 674 941 IPR001245 GO:0004672|GO:0006468
Cca10g00765 987 Gene3D Transferase(Phosphotransferase) domain 1 747 951 - -
Cca10g00765 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Cca10g00765 987 ProSiteProfiles EGF-like domain profile. 279 315 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00765 Cca-Chr10 8768602 8772925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00765 661 985 Receptor kinase-like Gene Family AT4G23140 54.381 1.03e-121 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca10g00765 PK_Tyr_Ser-Thr 8.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00765 - - gmx:100807185 1362.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00765 10 8768602 8772925 Cca10g00765 10 8768602 8772925 ECH