Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00738 ATGGCGCTCGAGGTTCTCTCAACGCACCGTTTAAACTCCTTCTTGGAAATCCGAAGGGACGAGATCATGAGGCTCGTGCGAAAGCTAGCTCACGACTCACACAACGGCTTTACCAAAGTGGAACTTAAGTCAAGGTTTTCGGAAATGACGTTTAACACTATAATGAGGATGATATCGGGGAAGAGATACTATGGTAAAGATTGTGATGTGAGTGACTTGGAAGAAGCAAGGCAATTTAGAGAGATTATTAAAGAGTTGGTGACGTTAGGAGGGGCGAATAACCCTAGCGATTTTTTGCCTTTGCTTATGTGGTTTGATTACGATAGTTTGAAGAAGAGGCTAAAGAGGATTAGTAAGAGAACCGATGCGTTCTTACAAGGACTCATTGATGAGCGTCGTAATGGGAAGCACAGTGCTAATACTATGATAGACCATCTCCTAACTCAACAACGATCACAACCTGAATACTACACGGATCAAATCATCAAAGGACTTGCTCTGGTTATGCTACTTGCAGGAACAGACACATCATCAATAACATTAGAATGGGCCATGTCTAATCTATTAAACCATCCAGAAATATTGAAGAAGGCAAAAAATGAATTAGACACTCATATTAGACAAAATTGCTTAGTTGATGAACCTGACCTTTCGAAACTCTCCTACCTTCAGAGCATTGTTTATGAGACACTTCGTTTACATCCTGCTGCGCCAATAGATCCCAAGTTGTGGAGTGATCCAACACATTTTAAGCCCGAGAGGTTTGAGAAGGAAAGTGAAGCAAGCAAGTTACTTTCATTTGGATTAGGGAGGAGGGCTTGTCCTGGTGCAAACTTGGCCCAACGTACAGTCAGCTTAACTCTGGCCTTGTTAATTCAATGTTTTGAGTGGAAACGAACTAGCAAGGAAGAAATTGATATGACCGAAGGAAAAGGGATCACTATGCCAAAAAAGTTTCCCTTAGAAGCTATGTGCCAAGTGTGTCAATCACCAACAATTAATGGTATTTTCTAA 1014 0.4132 MALEVLSTHRLNSFLEIRRDEIMRLVRKLAHDSHNGFTKVELKSRFSEMTFNTIMRMISGKRYYGKDCDVSDLEEARQFREIIKELVTLGGANNPSDFLPLLMWFDYDSLKKRLKRISKRTDAFLQGLIDERRNGKHSANTMIDHLLTQQRSQPEYYTDQIIKGLALVMLLAGTDTSSITLEWAMSNLLNHPEILKKAKNELDTHIRQNCLVDEPDLSKLSYLQSIVYETLRLHPAAPIDPKLWSDPTHFKPERFEKESEASKLLSFGLGRRACPGANLAQRTVSLTLALLIQCFEWKRTSKEEIDMTEGKGITMPKKFPLEAMCQVCQSPTINGIF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00738 337 Pfam Cytochrome P450 240 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00738 337 Pfam Cytochrome P450 9 238 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00738 337 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 239 - -
Cca10g00738 337 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 240 327 - -
Cca10g00738 337 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 267 276 IPR017972 GO:0005506|GO:0016705
Cca10g00738 337 PRINTS E-class P450 group I signature 274 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00738 337 PRINTS E-class P450 group I signature 161 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00738 337 PRINTS E-class P450 group I signature 233 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00738 337 PRINTS E-class P450 group I signature 264 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00738 337 PRINTS E-class P450 group I signature 49 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00738 337 PRINTS E-class P450 group I signature 181 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00738 337 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 1 239 - -
Cca10g00738 337 SUPERFAMILY Cytochrome P450 3 324 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00738 337 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 240 327 - -
Cca10g00738 337 PRINTS P450 superfamily signature 265 274 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00738 337 PRINTS P450 superfamily signature 172 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00738 337 PRINTS P450 superfamily signature 274 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00738 337 Gene3D Cytochrome P450 1 326 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00738 Cca-Chr10 8372639 8377210 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00738 2 327 Cytochrome P450 AT4G37340 54.444 6.66e-133 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00738 K13260 - gmx:100811727 577.4