Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00737 ATGAAAGATTATAAAGACCCGACAAATATCAAATTTAGGTTGTCATTAAAGATTCTTCTTAAATTAATACATGAGGTTATGCTACTTGCAGGAACAGACACATCATCAATAACATTAGAATGGGCCATGTCTAATCTATTAAACCATCCAGAAATATTGAAGAAGGCAAAAAATGAATTAGACACTCATATTAGACAAAATTGCTTAGTTGATGAACCTGACCTTTCGAAACTCTCCTACCTTCAGAGCATTGTTTATGAGACACTTCGTTTACATCCTGCTGCTCCAATGTTGGCACCCCATTTGTCTTCAGAATATTGCACCATAGGAGAATATAATGTCCCTCAAAACACAATTTTTTTAGTTAATGCTTGGGCTATTCACAGAGATCCCAAGTTGTGGAGTGATCCAACACATTTTAAGCCCGAGAGGTTTGAGAAGGAAAGTGAAGCAAGCAAGTTACTTTCATTTGGATTAGGGAGGAGGGCTTGTCCTGGTGCAAACTTGGCCCAACGTACAGTCAGCTTAACTCTGGCCTTGTTAATTCAATGTTTTGAGTGGAAAAGAACTAGCAAGGAAGAAATTGATATGACCGAAGGAAAAGGGGTCACTATGCCAAAAAAGTTTCCCTTAGAAGCTATGTGCCAAGTGTGTCAATCACCAACAATTAATGGTATTTTCTAA 684 0.3772 MKDYKDPTNIKFRLSLKILLKLIHEVMLLAGTDTSSITLEWAMSNLLNHPEILKKAKNELDTHIRQNCLVDEPDLSKLSYLQSIVYETLRLHPAAPMLAPHLSSEYCTIGEYNVPQNTIFLVNAWAIHRDPKLWSDPTHFKPERFEKESEASKLLSFGLGRRACPGANLAQRTVSLTLALLIQCFEWKRTSKEEIDMTEGKGVTMPKKFPLEAMCQVCQSPTINGIF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00737 227 PRINTS E-class P450 group I signature 19 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00737 227 PRINTS E-class P450 group I signature 39 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00737 227 PRINTS E-class P450 group I signature 82 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00737 227 PRINTS E-class P450 group I signature 123 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00737 227 PRINTS E-class P450 group I signature 154 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00737 227 PRINTS E-class P450 group I signature 164 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00737 227 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 22 217 - -
Cca10g00737 227 Gene3D Cytochrome P450 6 221 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00737 227 Pfam Cytochrome P450 24 208 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00737 227 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 22 217 - -
Cca10g00737 227 PRINTS P450 superfamily signature 164 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00737 227 PRINTS P450 superfamily signature 83 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00737 227 PRINTS P450 superfamily signature 155 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00737 227 PRINTS P450 superfamily signature 30 47 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g00737 227 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 157 166 IPR017972 GO:0005506|GO:0016705
Cca10g00737 227 SUPERFAMILY Cytochrome P450 23 214 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00737 Cca-Chr10 8356332 8357463 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00737 19 216 Cytochrome P450 AT5G36220 60.606 1.24e-92 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00737 K13260 - gmx:100811727 366.696