Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00718 ATGCTCGGAAAGGGAAGCTTGGGAACGATTTATAGAGCAGTGTTGGACGACGGTTGCACCGTGGTTGTGAAGAAACTGAAAGACGCTAACCCCTGCGAAGGGAATGAGTTTGAACAGTATATGGACGTTGTAGGGAAGCTGAAACACCCCAACATTGTGAGGCTGAGAGCTTATTATTACGCGAAGGAAGAAAAACTTCTGGTGTATGATTATCTCCCCAATGGAAGCTTGCATAACCTTCTCCATGGGAATAGGGGACCAGGGAGGATCCCATTGGATTGGACGAAAAGAATAAGCTTGGTGTTAGGAACGGCGAAAGGATTGGCTCGAATTCATGCGGAGTACAACACATCCAAGATACCTCACAAGAACGTGAAAGCTTCAAACGTGCTTCTGGACAAGAATAAGGTTGCTTGCGTTTTAGACATTGGGCTATTGTTGTTGTTGAATCTCGTTTACGCGATAGCCAGGTTGGGGGCATCGGAGCAGGTGGAGGTGAAGAGGCTTTCACAGGAGGCTGATGTGTACACGTTTGGGGTGTTGGTGTTGGAGGTTGCGATGGGGAGCGCCGTTGGAGCAGGGTGGCATGGATCTTCCAACGTGGGTGAGGTTAGTGCGGTGAAGGAGGAGGTGTTCGATGAGGAGCTGCTGAGATCCGACGTTGCCCCCTCTTCTTTCGCCTCTCTTGCCGCCACTCCAACCTCCACACCCTCTCACTACCACCACTACTATGCCCGCCGGACCCGCCTTCCTTTCCTCCTCGCCAAGAAGAACAAGAAGACCAAACCATCCTCTGACTCCGACCCTGATATCACCCTCAAGCGCAGCAAATCCATCGCTTGGACTTGTCGAGGTTGCAAGGAGGTCCCCGATGGCCACCAGGCGGGGCGACAAGGGGAAGCGGGGCGGTGA 912 0.5263 MLGKGSLGTIYRAVLDDGCTVVVKKLKDANPCEGNEFEQYMDVVGKLKHPNIVRLRAYYYAKEEKLLVYDYLPNGSLHNLLHGNRGPGRIPLDWTKRISLVLGTAKGLARIHAEYNTSKIPHKNVKASNVLLDKNKVACVLDIGLLLLLNLVYAIARLGASEQVEVKRLSQEADVYTFGVLVLEVAMGSAVGAGWHGSSNVGEVSAVKEEVFDEELLRSDVAPSSFASLAATPTSTPSHYHHYYARRTRLPFLLAKKNKKTKPSSDSDPDITLKRSKSIAWTCRGCKEVPDGHQAGRQGEAGR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00718 303 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 201 - -
Cca10g00718 303 SUPERFAMILY Protein kinase-like (PK-like) 1 195 IPR011009 -
Cca10g00718 303 PANTHER LRR RECEPTOR-LIKE KINASE 1 201 - -
Cca10g00718 303 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g00718 303 Pfam Protein tyrosine and serine/threonine kinase 2 187 IPR001245 GO:0004672|GO:0006468
Cca10g00718 303 Gene3D Transferase(Phosphotransferase) domain 1 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00718 Cca-Chr10 8140869 8142122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00718 1 190 Receptor kinase-like Gene Family AT2G36570 74.227 1.29e-96 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Cca10g00718 PK_Tyr_Ser-Thr 2.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00718 - - ccaj:109805695 429.098