LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca10g00691	ATGTCATTTCCCCCGCCGTCGCTGGCAACGGCGGCAACCCCGACGGAGCTCCCGATCCGGCAGATTCCGGGGAGCTACGGGTTGCCCTTGGTGGGTCCGGTTTCGGACCGTCTGGACTACTTCTGGTTCCAGAAGCCGGAAAGCTTCTTCAGGAAGCGAATGGAGAAGCACAAGAGCAGCGTGTTCCGCACGAACGTTCCTCCCTCTTTCCCGTTCTTCCTGAACGTTAACCCTAACGTCATCGCCCTCCTGGATTGCAAATCCTTCTCCCACCTCTTCGACATGGACCTCGTCGACAAGAAGGACGTCCTCGTCGGAGACTTCGTCCCCAGCCTCGCCTTCACCGGAAACCTCAGGGTCGGCGTTTACCAGGACACCACCGACCCTCAACATGCCAAGGTGAAGAACTACATCATGGATATCTTGAAACGAAGCTCGGGCATATGGATACCAGAACTAGTATCTAACCTGGACACAATGTGGGAGAAGATCGAAGCATCACTCTCCAAATCCACATCTGTATCGTACATCTTCCCGCTACAACAATTTCTCTTCAGCTTCCTCTGCAAAGTCCTGGCCGGTGCAGACCCTTCCCTTGACCCCAAAATAGCAGAGTCAGGCTATGCCATGCTTGATCGTTGGCTCGCTCTTCAGCTCCTTCCCACAATCAGCATCGGCATCCTCCAACCCCTCGAAGAAATCTTCCTCCATTCCTTCGCCTACCCTTTTTTCCTCGTCAGCGGAGACTACAACAACATCTACAACTTCGTCAAACAACATGGCAAGGAAACTATAACCCGAGGCGAAACGGGTTTCGGGTTGACCCAAGAAGAGGCCATCCACAACTTGCTCTTCGTGCTGGGGTTCAACTCCTTCGGCGGCTTCTCCGTTTTCCTCCCCTCTCTGATCGAGGCCATAGCCTCCGACCCCACATTGCAGGACAACCTTAAAGCCGAAGCCAGGACAGCCTCGTCTCTCACCTTCGACTCCCTCAAACAGATGGACCTCGTCCACTCCGTCGTCTACGAAACGCTGCGCATGAACCCTCCGGTTCCGCTCCAGTACGGTCGTGCCCGAAAGGACTTCCGCCTCACTTCTCACGACTCCGTCTTCGCCGTCAAGAAGGGCGAGCTGCTCTGCGGCTTCCAGAAGCTCGTCATGAGAGACGCCGTTATCTTCGACCAACCCGAGACCTTCAAACCGGACCGCTTCACCGGGGAGAAGGGGGCCCAATTGCTTAACTACTTGTATTGGTCCAATGGGCCTCAAACTGGGTCTCCTACTGTGTCCAATAAACAGTGTGCGGGTAAGGACGTTGTCACGCTCACCGCTGCTTTCATTGTCGCTTACTTGCTTCGCAGGTATGATTCCATCAAAGGGGATGCCAGTTCCATCACTGCCCTTCAAAGGGCCAACTGA	1419	0.549	MSFPPPSLATAATPTELPIRQIPGSYGLPLVGPVSDRLDYFWFQKPESFFRKRMEKHKSSVFRTNVPPSFPFFLNVNPNVIALLDCKSFSHLFDMDLVDKKDVLVGDFVPSLAFTGNLRVGVYQDTTDPQHAKVKNYIMDILKRSSGIWIPELVSNLDTMWEKIEASLSKSTSVSYIFPLQQFLFSFLCKVLAGADPSLDPKIAESGYAMLDRWLALQLLPTISIGILQPLEEIFLHSFAYPFFLVSGDYNNIYNFVKQHGKETITRGETGFGLTQEEAIHNLLFVLGFNSFGGFSVFLPSLIEAIASDPTLQDNLKAEARTASSLTFDSLKQMDLVHSVVYETLRMNPPVPLQYGRARKDFRLTSHDSVFAVKKGELLCGFQKLVMRDAVIFDQPETFKPDRFTGEKGAQLLNYLYWSNGPQTGSPTVSNKQCAGKDVVTLTAAFIVAYLLRRYDSIKGDASSITALQRAN	472

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca10g00691	472	PRINTS	E-class P450 group IV signature	334	350	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Cca10g00691	472	PRINTS	E-class P450 group IV signature	371	385	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Cca10g00691	472	PRINTS	E-class P450 group IV signature	387	405	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Cca10g00691	472	PANTHER	CYTOCHROME P450 26	10	462	-	-
	Cca10g00691	472	SUPERFAMILY	Cytochrome P450	18	456	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Cca10g00691	472	PANTHER	INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED	10	462	-	-
	Cca10g00691	472	Pfam	Cytochrome P450	303	455	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Cca10g00691	472	Gene3D	Cytochrome P450	17	470	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca10g00691	Cca-Chr10	7718207	7724543	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca10g00691	95	471	Cytochrome P450	AT4G15440	59.269	4.30e-173	489

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca10g00691	K10528		-	gmx:100784395	803.897

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca10g00691	10	7718207	7724543	Cca10g00691	10	7718207	7724543	ECH